RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 NME5P56597 212 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 SKOR1P84550 965 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 PLOD1Q02809 727 aaPredicted RBP18.71■□□□□ 0.59
COL18A1-204ENST00000400337 CYB5D1Q6P9G0 228 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 HTR3CQ8WXA8 447 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 PGLYRP2Q96PD5 576 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 TLR8Q9NR97 1041 aaKnown RBP18.71■□□□□ 0.59
COL18A1-204ENST00000400337 GLP2RO95838 553 aa18.71■□□□□ 0.58
COL18A1-204ENST00000400337 PSEN2P49810 448 aa18.71■□□□□ 0.58
COL18A1-204ENST00000400337 CATSPERGQ6ZRH7 1159 aa18.71■□□□□ 0.58
COL18A1-204ENST00000400337 DNAJC19Q96DA6 116 aa18.71■□□□□ 0.58
COL18A1-204ENST00000400337 UNKQ9C0B0 810 aaKnown RBP18.71■□□□□ 0.58
COL18A1-204ENST00000400337 CYP39A1Q9NYL5 469 aa18.71■□□□□ 0.58
COL18A1-204ENST00000400337 EIF3LQ9Y262 564 aaKnown RBP18.71■□□□□ 0.58
COL18A1-204ENST00000400337 E5RJQ4 531 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 O00370 1275 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 TRIM16O95361 564 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 NQO1P15559 274 aaKnown RBP18.7■□□□□ 0.58
COL18A1-204ENST00000400337 SSTR1P30872 391 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 INPP5DQ92835 1189 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 TMEM120AQ9BXJ8 343 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 SYNDIG1Q9H7V2 258 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 RRAGCQ9HB90 399 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 RNF19AQ9NV58 838 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 RAB21Q9UL25 225 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 PCDHB5Q9Y5E4 795 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 TM9SF1O15321 606 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 CALCAP01258 141 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 HORMAD1Q86X24 394 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 EPS8L1Q8TE68 723 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 THAP11Q96EK4 314 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 SMARCD1Q96GM5 515 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 TAS2R14Q9NYV8 317 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 CYP3A7-CYP3A51PA0A087WV96 503 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 F8VP50 259 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 UBTFL6P0CB48 400 aaPredicted RBP18.7■□□□□ 0.58
COL18A1-204ENST00000400337 CCDC130P13994 396 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 ITGALP20701 1170 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 CYP3A7P24462 503 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 SCTRP47872 440 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 SLC6A3Q01959 620 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 ELAVL2Q12926 359 aaKnown RBP18.7■□□□□ 0.58
COL18A1-204ENST00000400337 KANSL3Q9P2N6 904 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 PNMA8BQ9ULN7 279 aaPredicted RBP18.7■□□□□ 0.58
COL18A1-204ENST00000400337 ARL4DP49703 201 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 EPHB3P54753 998 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 RCN1Q15293 331 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 CACHD1Q5VU97 1274 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 LRRC55Q6ZSA7 311 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 MYO1HQ8N1T3 1032 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 COPS5Q92905 334 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 EFCAB1Q9HAE3 211 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 SLC25A13Q9UJS0 675 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 BLOC1S6Q9UL45 172 aa18.7■□□□□ 0.58
COL18A1-204ENST00000400337 hCG_2014768A0A024R1R8 64 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 TBKBP1A7MCY6 615 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 E9PBE3 544 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 KCNK1O00180 336 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 KLHL41O60662 606 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 AXLP30530 894 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 CCDC85BQ15834 202 aaPredicted RBP18.69■□□□□ 0.58
COL18A1-204ENST00000400337 NT5DC4Q86YG4 428 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 TBC1D13Q9NVG8 400 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 ASTN1O14525 1302 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 MROH7Q68CQ1 1323 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 LZTS3O60299 673 aaPredicted RBP18.69■□□□□ 0.58
COL18A1-204ENST00000400337 RBP1P09455 135 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 GLRA2P23416 452 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 TBX4P57082 545 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 VPS50Q96JG6 964 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 XPNPEP3Q9NQH7 507 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 CHST7Q9NS84 486 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 WDR27A2RRH5 827 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 MANSC4A6NHS7 340 aaPredicted RBP18.69■□□□□ 0.58
COL18A1-204ENST00000400337 PLSCR1O15162 318 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 PLA2G6O60733 806 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 ADRB2P07550 413 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 VHLP40337 213 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 CCDC15Q0P6D6 951 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 MIIPQ5JXC2 388 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 PTF1AQ7RTS3 328 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 TEX9Q8N6V9 391 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 RRN3Q9NYV6 651 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 MAN1A2O60476 641 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 GRK2P25098 689 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 HNRNPH1P31943 449 aaKnown RBP18.69■□□□□ 0.58
COL18A1-204ENST00000400337 NBPF20Q3BBV1 942 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 FAM171A1Q5VUB5 890 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 RIOX2Q8IUF8 465 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 FBXO44Q9H4M3 255 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 NINJ2Q9NZG7 142 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 NCKIPSDQ9NZQ3 722 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 SELENONQ9NZV5 590 aa18.69■□□□□ 0.58
COL18A1-204ENST00000400337 MRPL42Q9Y6G3 142 aaKnown RBP18.69■□□□□ 0.58
COL18A1-204ENST00000400337 RECQL4O94761 1208 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 HMGCRP04035 888 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 TUBP50607 506 aa18.68■□□□□ 0.58
COL18A1-204ENST00000400337 BEX3Q00994 111 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms