RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 DCDC2Q9UHG0 476 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 IGSF9BQ9UPX0 1349 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 B2RBV5 119 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 TRIM13O60858 407 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 STIP1P31948 543 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 ITGA9Q13797 1035 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 CCDC126Q96EE4 140 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 KCTD10Q9H3F6 313 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 BATF3Q9NR55 127 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 COQ6Q9Y2Z9 468 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 FLT1P17948 1338 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 PNPLA7Q6ZV29 1317 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 A0A087WZ62 844 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 MSCO60682 206 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 NDUFB10O96000 172 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 CFIP05156 583 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 NUDT2P50583 147 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 MFSD10Q14728 455 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 LRRC8DQ7L1W4 858 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 DPP10Q8N608 796 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 C3orf20Q8ND61 904 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 OMA1Q96E52 524 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 NIF3L1Q9GZT8 377 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 POLG2Q9UHN1 485 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 PCDHB11Q9Y5F2 797 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 HECW2Q9P2P5 1572 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 MROH7Q68CQ1 1323 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 MSH4O15457 936 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 VPS4BO75351 444 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 PUDPQ08623 228 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 NAB2Q15742 525 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 MROH9Q5TGP6 573 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 SHC4Q6S5L8 630 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 C16orf59Q7L2K0 433 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 FAM9CQ8IZT9 166 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 FAM118BQ9BPY3 351 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 MXRA8Q9BRK3 442 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 PHACTR1Q9C0D0 580 aa11.36□□□□□ -0.59
CACNA1C-215ENST00000399637 CNTNAP2Q9UHC6 1331 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 M0QYT0 321 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 RGS5O15539 181 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 RPN2P04844 631 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 CYP2C8P10632 490 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ACO1P21399 889 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 FBXL19Q6PCT2 694 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 SNRNP27Q8WVK2 155 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 OSBPL8Q9BZF1 889 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 C10orf88Q9H8K7 445 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 DKK3Q9UBP4 350 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 UBQLN1Q9UMX0 589 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 USP27XA6NNY8 438 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 CLK3P49761 638 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 KLC1Q07866 573 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 CYLC2Q14093 348 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 RGMBQ6NW40 437 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 FRMD8P1Q9BZ68 369 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 UBXN6Q9BZV1 441 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 SETD4Q9NVD3 440 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 TIMM8BQ9Y5J9 83 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 MGAT4DA6NG13 374 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 GSTM1P09488 218 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 TEAD4Q15561 434 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 CDCA5Q96FF9 252 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 PPP1R16AQ96I34 528 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 C9orf72Q96LT7 481 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 PMPCBO75439 489 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 UBTFL6P0CB48 400 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 SRGNP10124 158 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 UCHL3P15374 230 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 TGM2P21980 687 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 COPAP53621 1224 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 SCRN3Q0VDG4 424 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 STX5Q13190 355 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 CCNIQ14094 377 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 NFIL3Q16649 462 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 NBPF12Q5TAG4 269 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ADGRF2Q8IZF7 708 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 TERB1Q8NA31 727 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 HPS3Q969F9 1004 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ERP27Q96DN0 273 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 SEC16BQ96JE7 1060 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ABCC3O15438 1527 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ROBO2Q9HCK4 1378 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 CST8O60676 142 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 ATP5BP06576 529 aaKnown RBP11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 VSNL1P62760 191 aa11.35□□□□□ -0.59
CACNA1C-215ENST00000399637 SRSF11Q05519 484 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms