RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ZFPM1Q8IX07 1006 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 MAML3Q96JK9 1138 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ATP13A3Q9H7F0 1226 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 INTS13Q9NVM9 706 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 TSPAN16Q9UKR8 245 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 CDYLQ9Y232 598 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 UQCRBP14927 111 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ZNF7P17097 686 aaPredicted RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 ITIH2P19823 946 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ACAT1P24752 427 aaKnown RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 CHMP1BQ7LBR1 199 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 OTOP1Q7RTM1 612 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 CCDC60Q8IWA6 550 aaPredicted RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 PLEKHA8Q96JA3 519 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 GBP5Q96PP8 586 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 GPR88Q9GZN0 384 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 KIAA1522Q9P206 1035 aaPredicted RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 ABI3Q9P2A4 366 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 PPARGC1AQ9UBK2 798 aaKnown RBP8.19□□□□□ -1.1
USP47-203ENST00000399455 INSL6Q9Y581 213 aa8.19□□□□□ -1.1
USP47-203ENST00000399455 ABHD14A-ACY1A0A1B0GW23 586 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 FAM205CA6NFA0 338 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 TRIM16O95361 564 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 EEF1B2P24534 225 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 TOMM20Q15388 145 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 COPS5Q92905 334 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 FAM105AQ9NUU6 356 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CLDND1Q9NY35 253 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CACNA2D2Q9NY47 1150 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 BTBD7Q9P203 1132 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 NDRG2Q9UN36 371 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 MRC1P22897 1456 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 URADA6NGE7 173 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 KPNA5O15131 536 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 SLC7A5Q01650 507 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 ACTN3Q08043 901 aaPredicted RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 CYP20A1Q6UW02 462 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 MYRIPQ8NFW9 859 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 JADE3Q92613 823 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 RERGQ96A58 199 aaPredicted RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 SFMBT1Q9UHJ3 866 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 NOVA2Q9UNW9 492 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 LRRC72A6NJI9 287 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CST8O60676 142 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 STAU1O95793 577 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 EOMESO95936 686 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CYP11B1P15538 503 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 GALCP54803 685 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 PTPN21Q16825 1174 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 GLT6D1Q7Z4J2 308 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 RASAL3Q86YV0 1011 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 C2orf15Q8WU43 125 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 EDEM1Q92611 657 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 MED8Q96G25 268 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 VMP1Q96GC9 406 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 RGS18Q9NS28 235 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 PLAAQ9Y263 795 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 ARVCFO00192 962 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 INPP4BO15327 924 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CSDE1O75534 798 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 CCDC130P13994 396 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 GABRR2P28476 465 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 GPR1P46091 355 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 LBX1P52954 281 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 GNA13Q14344 377 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 ANKMY2Q8IV38 441 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 MRPL48Q96GC5 212 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 C17orf80Q9BSJ5 609 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 DUS2Q9NX74 493 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 A0A0A6YYK5 440 aaPredicted RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 MAGEB16A2A368 324 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 EVPLLA8MZ36 301 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 H3BMM5 538 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 AVILO75366 819 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 RASSF9O75901 435 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 IL1BP01584 269 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 NR2C2P49116 596 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 SOX10P56693 466 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CCDC85BQ15834 202 aaPredicted RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 RAET1GQ6H3X3 334 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 LEMD2Q8NC56 503 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 OSBPL8Q9BZF1 889 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 TRIT1Q9H3H1 467 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 FBXL5Q9UKA1 691 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 ZSCAN5CA6NGD5 496 aaPredicted RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 ZNF862O60290 1169 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CCDC22O60826 627 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 ITGAXP20702 1163 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 CARSP49589 748 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 YWHAZP63104 245 aaKnown RBP8.18□□□□□ -1.1
USP47-203ENST00000399455 PFKPQ01813 784 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 SGO1Q5FBB7 561 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 KCTD16Q68DU8 428 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 NT5DC3Q86UY8 548 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 ZSCAN1Q8NBB4 408 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 PITPNM3Q9BZ71 974 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 ZNF711Q9Y462 761 aa8.18□□□□□ -1.1
USP47-203ENST00000399455 SYN3O14994 580 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 HNRNPRO43390 633 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms