RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 ABCA5Q8WWZ7 1642 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 ARAP3Q8WWN8 1544 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 RBBP4Q09028 425 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 BIKQ13323 160 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 MZT2BQ6NZ67 158 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 MZT2AQ6P582 158 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 ZNF605Q86T29 641 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 MPP4Q96JB8 637 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 DNAJC1Q96KC8 554 aaKnown RBP11.94□□□□□ -0.5
HLCS-202ENST00000399120 NAT9Q9BTE0 207 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 RACGAP1Q9H0H5 632 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 NDOR1Q9UHB4 597 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
HLCS-202ENST00000399120 GSG1L2A8MUP6 293 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 MGRN1O60291 552 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 PCDH8O95206 1070 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 CPA3P15088 417 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 SKIV2L2P42285 1042 aaKnown RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 CORO7P57737 925 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 OTUD3Q5T2D3 398 aaPredicted RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 SLFN11Q7Z7L1 901 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 MIB1Q86YT6 1006 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 EPS8L3Q8TE67 593 aaKnown RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 RIBC2Q9H4K1 309 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 RFX7Q2KHR2 1363 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 TMEM2Q9UHN6 1383 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 ERI2A8K979 691 aaKnown RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 ATP9AO75110 1047 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 GARTP22102 1010 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 KPNA1P52294 538 aaPredicted RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 KDM7AQ6ZMT4 941 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 TRMT11Q7Z4G4 463 aaKnown RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 ACOT9Q9Y305 439 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 ACO1P21399 889 aaKnown RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 TPP2P29144 1249 aaPredicted RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 ZNF157P51786 506 aaPredicted RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 NEDD8Q15843 81 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 AMHR2Q16671 573 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 SPACA7Q96KW9 195 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 ZNF112Q9UJU3 913 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 STARD13Q9Y3M8 1113 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 MYMKA6NI61 221 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 F9P00740 461 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 CKMP06732 381 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 NR3C2P08235 984 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 CLK2P49760 499 aaKnown RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 HK2P52789 917 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 IL2P60568 153 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 EXOSC10Q01780 885 aaKnown RBP11.93□□□□□ -0.5
HLCS-202ENST00000399120 PRKAA1Q13131 559 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 TAF4O00268 1085 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 CUL2Q13617 745 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 SCAIQ8N9R8 606 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 CATSPER2Q96P56 530 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 ATAD3AQ9NVI7 634 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 SHANK2Q9UPX8 1470 aa11.93□□□□□ -0.5
HLCS-202ENST00000399120 F8VZ95 297 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 MPOP05164 745 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 C21orf59P57076 290 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 FMR1Q06787 632 aaKnown RBP eCLIP11.92□□□□□ -0.54e-9■■■□□ 18
HLCS-202ENST00000399120 NR1I3Q14994 352 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 CCDC153Q494R4 210 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 KLHDC7AQ5VTJ3 777 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 ANKS1AQ92625 1134 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 UGT2B28Q9BY64 529 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 GSTK1Q9Y2Q3 226 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 C17orf102A2RUQ5 167 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 CCDC154A6NI56 674 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
HLCS-202ENST00000399120 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
HLCS-202ENST00000399120 TFDP3Q5H9I0 405 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 STRIP1Q5VSL9 837 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 LIN54Q6MZP7 749 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 SGMS1Q86VZ5 419 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 ELOA2Q8IYF1 753 aaPredicted RBP11.92□□□□□ -0.5
HLCS-202ENST00000399120 MAML3Q96JK9 1138 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 PABPC3Q9H361 631 aaKnown RBP11.92□□□□□ -0.5
HLCS-202ENST00000399120 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 PIK3CDO00329 1044 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 ZNF543Q08ER8 600 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 MTDHQ86UE4 582 aaKnown RBP11.92□□□□□ -0.5
HLCS-202ENST00000399120 TMEM132CQ8N3T6 1108 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 EEF1AKMT1Q8WVE0 214 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 CELF1Q92879 486 aaKnown RBP11.92□□□□□ -0.5
HLCS-202ENST00000399120 TBC1D13Q9NVG8 400 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 CMTM6Q9NX76 183 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 KLK14Q9P0G3 267 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 O00370 1275 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 KATNA1O75449 491 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 SLC25A27O95847 323 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 LDLRP01130 860 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 CCR4P51679 360 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 R3HCC1LQ7Z5L2 792 aaKnown RBP11.92□□□□□ -0.5
HLCS-202ENST00000399120 KYQ8NBH2 561 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 PROX1Q92786 737 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 CIPCQ9C0C6 399 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 RSPH9Q9H1X1 276 aaPredicted RBP11.92□□□□□ -0.5
HLCS-202ENST00000399120 WHRNQ9P202 907 aa11.92□□□□□ -0.5
HLCS-202ENST00000399120 PLA2G4CQ9UP65 541 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms