RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZNF534Q76KX8 674 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 LMNTD2Q8IXW0 634 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 WDR60Q8WVS4 1066 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 ZNF333Q96JL9 665 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 ZNF670Q9BS34 389 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 RNPEPQ9H4A4 650 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 ITGA11Q9UKX5 1188 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 EVPLQ92817 2033 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 A0A087WZ62 844 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 NVLO15381 856 aaKnown RBP26.49■■□□□ 1.83
COL13A1-203ENST00000398969 KRT38O76015 456 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 SDC4P31431 198 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 VHLP40337 213 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 IGBP1P78318 339 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 CHI3L2Q15782 390 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 TEX44Q53QW1 395 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 MTBPQ96DY7 904 aa26.49■■□□□ 1.83
COL13A1-203ENST00000398969 FDXACB1Q9BRP7 624 aaPredicted RBP26.49■■□□□ 1.83
COL13A1-203ENST00000398969 TRIM56Q9BRZ2 755 aaKnown RBP26.49■■□□□ 1.83
COL13A1-203ENST00000398969 CYB561D2O14569 222 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 PSMG1O95456 288 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 RBP5P82980 135 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 TRMT10BQ6PF06 316 aaKnown RBP26.48■■□□□ 1.83
COL13A1-203ENST00000398969 ARID3BQ8IVW6 561 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-203ENST00000398969 SHCBP1Q8NEM2 672 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 KHSRPQ92945 711 aaKnown RBP eCLIP26.48■■□□□ 1.83
COL13A1-203ENST00000398969 SIGLEC10Q96LC7 697 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 DPP3Q9NY33 737 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 CCDC195A0A1B0GUA6 201 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 CAPN14A8MX76 684 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 MDM4O15151 490 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 METTL18O95568 372 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 POU5F1BQ06416 359 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 NUDCD3Q8IVD9 361 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 CDKL3Q8IVW4 592 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-203ENST00000398969 TTC39CQ8N584 583 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 GSDMBQ8TAX9 411 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 NRG4Q8WWG1 115 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 ACAP3Q96P50 834 aa26.48■■□□□ 1.83
COL13A1-203ENST00000398969 ZNF395Q9H8N7 513 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-203ENST00000398969 HMX2A2RU54 273 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 FAM159BA6NKW6 160 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 STAU1O95793 577 aaKnown RBP26.47■■□□□ 1.83
COL13A1-203ENST00000398969 ARF4P18085 180 aaPredicted RBP26.47■■□□□ 1.83
COL13A1-203ENST00000398969 SLC6A3Q01959 620 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 PPP6R3Q5H9R7 873 aaPredicted RBP26.47■■□□□ 1.83
COL13A1-203ENST00000398969 PPP1R26Q5T8A7 1209 aaPredicted RBP26.47■■□□□ 1.83
COL13A1-203ENST00000398969 SNX30Q5VWJ9 437 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 TREML1Q86YW5 311 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 MPP5Q8N3R9 675 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 MS4A4AQ96JQ5 239 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 EBNA1BP2Q99848 306 aaKnown RBP26.47■■□□□ 1.83
COL13A1-203ENST00000398969 FAM124BQ9H5Z6 455 aaPredicted RBP26.47■■□□□ 1.83
COL13A1-203ENST00000398969 NRDE2Q9H7Z3 1164 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 PCMTD2Q9NV79 361 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 MAD1L1Q9Y6D9 718 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 KAT6AQ92794 2004 aa26.47■■□□□ 1.83
COL13A1-203ENST00000398969 CPA2P48052 419 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 STILQ15468 1287 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 PKDCCQ504Y2 493 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 C4orf22Q6V702 233 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 TTC30AQ86WT1 665 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 TXNP10599 105 aaKnown RBP26.46■■□□□ 1.83
COL13A1-203ENST00000398969 CYP2F1P24903 491 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 PGM1P36871 562 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 HDAC4P56524 1084 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 SLC34A1Q06495 639 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 IFNLR1Q8IU57 520 aaPredicted RBP26.46■■□□□ 1.83
COL13A1-203ENST00000398969 SCUBE3Q8IX30 993 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 GTF3C2Q8WUA4 911 aaPredicted RBP26.46■■□□□ 1.83
COL13A1-203ENST00000398969 SLC4A5Q9BY07 1137 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 WWP1Q9H0M0 922 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 PPARGC1AQ9UBK2 798 aaKnown RBP26.46■■□□□ 1.83
COL13A1-203ENST00000398969 C2CD2Q9Y426 696 aa26.46■■□□□ 1.83
COL13A1-203ENST00000398969 CAPN9O14815 690 aa26.45■■□□□ 1.83
COL13A1-203ENST00000398969 PDHA1P08559 390 aa26.45■■□□□ 1.83
COL13A1-203ENST00000398969 NDUFAF2Q8N183 169 aa26.45■■□□□ 1.83
COL13A1-203ENST00000398969 ARHGAP24Q8N264 748 aa26.45■■□□□ 1.83
COL13A1-203ENST00000398969 SMC1BQ8NDV3 1235 aa26.45■■□□□ 1.83
COL13A1-203ENST00000398969 RAB3IL1Q8TBN0 382 aa26.45■■□□□ 1.83
COL13A1-203ENST00000398969 ERAP1Q9NZ08 941 aa26.45■■□□□ 1.83
COL13A1-203ENST00000398969 ZSWIM8A7E2V4 1837 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 B2RBV5 119 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 PDHXO00330 501 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 SNNO75324 88 aaPredicted RBP26.45■■□□□ 1.82
COL13A1-203ENST00000398969 TBX10O75333 385 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 GCATO75600 419 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 INSRRP14616 1297 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 TPSB2P20231 275 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 CRHR1P34998 444 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 MRPS35P82673 323 aaKnown RBP26.45■■□□□ 1.82
COL13A1-203ENST00000398969 CDK18Q07002 472 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 TPSAB1Q15661 275 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 MROH9Q5TGP6 573 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 GPRC5AQ8NFJ5 357 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 STMN2Q93045 179 aa26.45■■□□□ 1.82
COL13A1-203ENST00000398969 ZNF487B1APH4 448 aa26.44■■□□□ 1.82
COL13A1-203ENST00000398969 PAPSS1O43252 624 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 ENO1P06733 434 aaKnown RBP26.44■■□□□ 1.82
COL13A1-203ENST00000398969 BPGMP07738 259 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms