RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 PEX1O43933 1283 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 SUPT7LO94864 414 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 TGM2P21980 687 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ITGA8P53708 1063 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ITGADQ13349 1161 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 ARMC3Q5W041 872 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ARID3BQ8IVW6 561 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 GPSM3Q9Y4H4 160 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 TLL1O43897 1013 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PHF2O75151 1096 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 FAM86B2P0C5J1 330 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PSMB9P28065 219 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 ABCG1P45844 678 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 OXCT1P55809 520 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 SRSF11Q05519 484 aaKnown RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 KBTBD2Q8IY47 623 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 FAM172AQ8WUF8 416 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 KLHL4Q9C0H6 718 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 PRMT7Q9NVM4 692 aaPredicted RBP9.61□□□□□ -0.87
ATL3-201ENST00000398868 IL1RAPL1Q9NZN1 696 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 DNAJC16Q9Y2G8 782 aa9.61□□□□□ -0.87
ATL3-201ENST00000398868 UBOX5O94941 541 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ITGAXP20702 1163 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 DEFB115Q30KQ5 88 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 MTDHQ86UE4 582 aaKnown RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 RCOR2Q8IZ40 523 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 RFFLQ8WZ73 363 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 OSBPL8Q9BZF1 889 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 MTO1Q9Y2Z2 717 aaKnown RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 IGSF9BQ9UPX0 1349 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ATP6V1C1P21283 382 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 OR1E1P30953 314 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 IL12RB1P42701 662 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 FXR1P51114 621 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATL3-201ENST00000398868 SCUBE1Q8IWY4 988 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 OR6K2Q8NGY2 324 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ACOX2Q99424 681 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 IL25Q9H293 177 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 RNF17Q9BXT8 1623 aaKnown RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 STK36Q9NRP7 1315 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 TISP43B9A030 160 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 F8W810 466 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 H7C4K7 107 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ENTPD3O75355 529 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 COPAP53621 1224 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ZNF57Q68EA5 555 aaPredicted RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 KRT73Q86Y46 540 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 SYTL5Q8TDW5 730 aaPredicted RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 CASKIN2Q8WXE0 1202 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 LRRC39Q96DD0 335 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ECSITQ9BQ95 431 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ZNHIT2Q9UHR6 403 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ZNF862O60290 1169 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 IL18RAPO95256 599 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 AP5B1Q2VPB7 878 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 MCRS1Q96EZ8 462 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 TMEM121Q9BTD3 319 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 POLR1BQ9H9Y6 1135 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 VTI1BQ9UEU0 232 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 MSRAQ9UJ68 235 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ZMYND8Q9ULU4 1186 aaPredicted RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 NDRG2Q9UN36 371 aaKnown RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 SNCAIPQ9Y6H5 919 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 PVALEFA0A1B0GWK0 134 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 C2orf81A6NN90 581 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 O00370 1275 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 TRIM24O15164 1050 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 CCNT2O60583 730 aaKnown RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 NFICP08651 508 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ACADSP16219 412 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 PRIM2P49643 509 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 POTEAQ6S8J7 498 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ATG14Q6ZNE5 492 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 GPRASP2Q96D09 838 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 TINF2Q9BSI4 451 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 PACSIN1Q9BY11 444 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 AASDHPPTQ9NRN7 309 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 CAMSAP1Q5T5Y3 1602 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 H3BQF6 201 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 AHCYL1O43865 530 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 KLHL2O95198 593 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 SHROOM1Q2M3G4 852 aaPredicted RBP9.6□□□□□ -0.87
ATL3-201ENST00000398868 ARMC4Q5T2S8 1044 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 RAD9BQ6WBX8 426 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 VANGL2Q9ULK5 521 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 ZDHHC9Q9Y397 364 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 DUSP10Q9Y6W6 482 aa9.6□□□□□ -0.87
ATL3-201ENST00000398868 TNFRSF21O75509 655 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 JCHAINP01591 159 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 AMHP03971 560 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 MAGEA4P43358 317 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 NPTX2P47972 431 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 PUDPQ08623 228 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 ACVR2BQ13705 512 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 CLVS1Q8IUQ0 354 aaPredicted RBP9.59□□□□□ -0.87
ATL3-201ENST00000398868 LGI2Q8N0V4 545 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 ZSCAN18Q8TBC5 510 aaPredicted RBP9.59□□□□□ -0.87
ATL3-201ENST00000398868 MYCBPAPQ8TBZ2 947 aa9.59□□□□□ -0.87
ATL3-201ENST00000398868 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms