RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 HOXC13P31276 330 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 SEMA3BQ13214 749 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 NFE2Q16621 373 aaPredicted RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 C15orf59Q2T9L4 293 aaPredicted RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 LRRC31Q6UY01 552 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 PCDH19Q8TAB3 1148 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 CPT1BQ92523 772 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 CSPG4P5Q96PW8 444 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 CALN1Q9BXU9 219 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 XAB2Q9HCS7 855 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 MTMR10Q9NXD2 777 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 DONSONQ9NYP3 566 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 ELNP15502 786 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 GRK4P32298 578 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 CXCR3P49682 368 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 PSEN1P49768 467 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 DEUP1Q05D60 604 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 EIF4EBP2Q13542 120 aaPredicted RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 DAB2IPQ5VWQ8 1189 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 MSANTD2Q6P1R3 559 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 TFB1MQ8WVM0 346 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 RIN2Q8WYP3 895 aaPredicted RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 HAPLN3Q96S86 360 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 GOLGA2P5Q9HBQ8 144 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 OLA1Q9NTK5 396 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 RNF19AQ9NV58 838 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 OGDHLQ9ULD0 1010 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 SMG5Q9UPR3 1016 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 FGF10O15520 208 aaPredicted RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 PRPF4O43172 522 aaKnown RBP eCLIP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 LTFP02788 710 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 RBP3P10745 1247 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 SEMA5AQ13591 1074 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 MRPL58Q14197 206 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 SMTNL2Q2TAL5 461 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 NCBP2-AS2Q69YL0 99 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 OVOS1Q6IE37 1185 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 NPAS4Q8IUM7 802 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 SPATA2LQ8IUW3 424 aaPredicted RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 TMEM130Q8N3G9 435 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 OVCA2Q8WZ82 227 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 PLEKHA4Q9H4M7 779 aa7.66□□□□□ -1.18
RGPD1-201ENST00000398193 NGRNQ9NPE2 291 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 TRMT13Q9NUP7 481 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 NOVA2Q9UNW9 492 aaKnown RBP7.66□□□□□ -1.18
RGPD1-201ENST00000398193 TULP2O00295 520 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 RTN3O95197 1032 aaPredicted RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 PECAM1P16284 738 aaPredicted RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SERPINB6P35237 376 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 MAP3K7CLP57077 242 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 KLHDC8BQ8IXV7 354 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 GPR65Q8IYL9 337 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 PDIK1LQ8N165 341 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 LZTR1Q8N653 840 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 ALKBH8Q96BT7 664 aaKnown RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 ZFP42Q96MM3 310 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 TSGA13Q96PP4 275 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 NSRP1Q9H0G5 558 aaKnown RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SAYSD1Q9NPB0 183 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 PAK6Q9NQU5 681 aaPredicted RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 TRHDEQ9UKU6 1024 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SCML2Q9UQR0 700 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 PCDHB7Q9Y5E2 793 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 ERI2A8K979 691 aaKnown RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 WASH4PA8MWX3 477 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 H7C0C1 242 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SHBGP04278 402 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 CD48P09326 243 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SLC2A3P11169 496 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 MAGEA3P43357 314 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 ATP5OP48047 213 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SCYL2Q6P3W7 929 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 LPPQ93052 612 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 TMEM121Q9BTD3 319 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SMOC2Q9H3U7 446 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 FBXO44Q9H4M3 255 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 IGSF9Q9P2J2 1179 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 ZNF180Q9UJW8 692 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 SCN1AP35498 2009 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 EEF2KO00418 725 aaKnown RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 DCLK1O15075 740 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 KPNA1P52294 538 aaPredicted RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 MAGOHP61326 146 aaKnown RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 PPP2R5DQ14738 602 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 KCNT1Q5JUK3 1230 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 ANKRD33Q7Z3H0 272 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 TAX1BP1Q86VP1 789 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 FAM126BQ8IXS8 530 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 PIWIL1Q96J94 861 aaKnown RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 TOX2Q96NM4 488 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 HINFPQ9BQA5 517 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 XPO7Q9UIA9 1087 aaKnown RBP7.65□□□□□ -1.18
RGPD1-201ENST00000398193 COL4A6Q14031 1691 aa7.65□□□□□ -1.18
RGPD1-201ENST00000398193 MX2P20592 715 aa7.65□□□□□ -1.19
RGPD1-201ENST00000398193 GEMIN4P57678 1058 aaKnown RBP7.65□□□□□ -1.19
RGPD1-201ENST00000398193 RFX8Q6ZV50 586 aa7.65□□□□□ -1.19
RGPD1-201ENST00000398193 BHLHA9Q7RTU4 235 aa7.65□□□□□ -1.19
RGPD1-201ENST00000398193 CCDC117Q8IWD4 279 aaPredicted RBP7.65□□□□□ -1.19
RGPD1-201ENST00000398193 ATXN2LQ8WWM7 1075 aaKnown RBP7.65□□□□□ -1.19
RGPD1-201ENST00000398193 C1orf74Q96LT6 269 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms