RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 PAK5Q9P286 719 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 NAALADL1Q9UQQ1 740 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 TSC2P49815 1807 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.6□□□□□ -0.39
ITGB1-202ENST00000396033 BCLAF3A2AJT9 711 aaKnown RBP12.6□□□□□ -0.39
ITGB1-202ENST00000396033 INHAP05111 366 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 DEUP1Q05D60 604 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 FAM182AQ5T1J6 154 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 ZNF598Q86UK7 904 aaKnown RBP12.6□□□□□ -0.39
ITGB1-202ENST00000396033 SLC7A14Q8TBB6 771 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 CNGB3Q9NQW8 809 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 DSEQ9UL01 958 aa12.6□□□□□ -0.39
ITGB1-202ENST00000396033 YJEFN3A6XGL0 299 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 E7ENQ6 273 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 TOMM70O94826 608 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 USP17L7P0C7H9 530 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 RNASELQ05823 741 aaKnown RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 MTM1Q13496 603 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 INTS6LQ5JSJ4 861 aaKnown RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 PDIK1LQ8N165 341 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 PXYLP1Q8TE99 480 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 PYROXD1Q8WU10 500 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 RSPH1Q8WYR4 309 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 NT5C3BQ969T7 300 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 ACBD6Q9BR61 282 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 CFHR5Q9BXR6 569 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 LGALS13Q9UHV8 139 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 A0A1W2PQ45 241 aaPredicted RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 A0A1W2PQY0 241 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 CYP11A1P05108 521 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 AMPD1P23109 780 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 TMED2Q15363 201 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 MSS51Q4VC12 460 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 SYCP2LQ5T4T6 812 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 CD300LGQ6UXG3 332 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 CCDC33Q8N5R6 958 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 RTP4Q96DX8 246 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 XPO6Q96QU8 1125 aaKnown RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 CCT8L2Q96SF2 557 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 STARD7Q9NQZ5 370 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 RAB6BQ9NRW1 208 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 RAB41Q5JT25 222 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 NCBP2-AS2Q69YL0 99 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 GLB1LQ6UWU2 654 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 CTU1Q7Z7A3 348 aaKnown RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 PSTKQ8IV42 348 aaKnown RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 RIBC1Q8N443 379 aaPredicted RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 ZNF473Q8WTR7 871 aaKnown RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 TMPRSS4Q9NRS4 437 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 RGS18Q9NS28 235 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 PIGVQ9NUD9 493 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 INTS9Q9NV88 658 aaKnown RBP12.59□□□□□ -0.39
ITGB1-202ENST00000396033 FAM169AQ9Y6X4 670 aa12.59□□□□□ -0.39
ITGB1-202ENST00000396033 GMNCA6NCL1 334 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 POC1B-GALNT4F8VUJ3 575 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 F8W810 466 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 M0QZQ0 153 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 ITGB1P05556 798 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 NR2C2P49116 596 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 SLC10A2Q12908 348 aaPredicted RBP12.58□□□□□ -0.39
ITGB1-202ENST00000396033 SLC45A4Q5BKX6 768 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 EFHC2Q5JST6 749 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 OVOS1Q6IE37 1185 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 BNIPLQ7Z465 357 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 CYP4X1Q8N118 509 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 ATP11CQ8NB49 1132 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 FBXO36Q8NEA4 188 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 ADAM32Q8TC27 787 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 CENPTQ96BT3 561 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 TSEN34Q9BSV6 310 aaKnown RBP12.58□□□□□ -0.39
ITGB1-202ENST00000396033 ETNK2Q9NVF9 386 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 RCOR3Q9P2K3 495 aaPredicted RBP12.58□□□□□ -0.39
ITGB1-202ENST00000396033 MFHAS1Q9Y4C4 1052 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 USP3Q9Y6I4 520 aa12.58□□□□□ -0.39
ITGB1-202ENST00000396033 FOXO6A8MYZ6 492 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 HHLA1C9JL84 531 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 FAM107AO95990 144 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 NCAM1P13591 858 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 BDNFP23560 247 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 KCNJ11Q14654 390 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 MBTPS1Q14703 1052 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 SPRED3Q2MJR0 410 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 OR10T2Q8NGX3 314 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 RNF139Q8WU17 664 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 KLC2Q9H0B6 622 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 E7ESA3 106 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 H3BRJ5 948 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 EBAG9O00559 213 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 CHADO15335 359 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 CREB3O43889 395 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 LTFP02788 710 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 FYNP06241 537 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 PAX3P23760 479 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 PHBP35232 272 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 XRCC4Q13426 336 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 FAXCQ5TGI0 409 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
ITGB1-202ENST00000396033 DCLRE1AQ6PJP8 1040 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms