RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TFAMQ00059 246 aaKnown RBP14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 CYP27A1Q02318 531 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 TMEM119Q4V9L6 283 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 PRAMEF14Q5SWL7 426 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 SFMBT2Q5VUG0 894 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 BROXQ5VW32 411 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 SLFN12LQ6IEE8 588 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 KANSL1Q7Z3B3 1105 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 BRSK2Q8IWQ3 736 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 DHX40Q8IX18 779 aaKnown RBP14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 SNX19Q92543 992 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 NAF1Q96HR8 494 aaKnown RBP14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 KLF16Q9BXK1 252 aaPredicted RBP14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 ST6GALNAC4Q9H4F1 302 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 ITGA11Q9UKX5 1188 aa14.49□□□□□ -0.09
VCPKMT-201ENST00000395859 SPENQ96T58 3664 aaKnown RBP14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 K7ENP7 123 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 LAD1O00515 517 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 IGHV4-34P06331 123 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 GP1BBP13224 206 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 PRKCHP24723 683 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 YWHAQP27348 245 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 PRPHP41219 470 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 MFAP3P55082 362 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 GUCY1B3Q02153 619 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 ST3GAL1Q11201 340 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 TRIM29Q14134 588 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 GEN1Q17RS7 908 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 INO80CQ6PI98 192 aaPredicted RBP14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 TPGS1Q6ZTW0 290 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 FAM124AQ86V42 546 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 NUP93Q8N1F7 819 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 CSGALNACT2Q8N6G5 542 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 EXD3Q8N9H8 876 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 DPH1Q9BZG8 443 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 ZNF518BQ9C0D4 1074 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 CHORDC1Q9UHD1 332 aaPredicted RBP14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 PCDHB1Q9Y5F3 818 aa14.48□□□□□ -0.09
VCPKMT-201ENST00000395859 PENKP01210 267 aaPredicted RBP14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 WNT1P04628 370 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 EPHA8P29322 1005 aaPredicted RBP14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 ERVPABLB-1P60509 514 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 RACK1P63244 317 aaKnown RBP14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 RBP5P82980 135 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 CAMK2GQ13555 558 aaPredicted RBP14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 ZNF234Q14588 700 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 MDH1BQ5I0G3 518 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 KIAA1614Q5VZ46 1190 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 ZNF574Q6ZN55 896 aaPredicted RBP14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 Q6ZNB5 142 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 EID2Q8N6I1 236 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 SCAMP5Q8TAC9 235 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 FBXO32Q969P5 355 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 PIWIL1Q96J94 861 aaKnown RBP14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 STRA6Q9BX79 667 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 PARVGQ9HBI0 331 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 ASCL3Q9NQ33 180 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 STARD5Q9NSY2 213 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 NBASA2RRP1 2371 aa14.47□□□□□ -0.09
VCPKMT-201ENST00000395859 PTPRJQ12913 1337 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 CLEC18AA5D8T8 446 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 PPP1R37O75864 691 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 RTN3O95197 1032 aaPredicted RBP14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 SEMA4FO95754 770 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 PDGFRBP09619 1106 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 IRF1P10914 325 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 ACADMP11310 421 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 CKMT2P17540 419 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 ACP1P24666 158 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 CDCP2Q5VXM1 449 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 CLEC18BQ6UXF7 455 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 CACUL1Q86Y37 369 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 MYCT1Q8N699 235 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 CLEC18CQ8NCF0 446 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 OR2T3Q8NH03 318 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 KCNE4Q8WWG9 221 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 ELOVL4Q9GZR5 314 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 EBF2Q9HAK2 575 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 PLK2Q9NYY3 685 aa14.46□□□□□ -0.09
VCPKMT-201ENST00000395859 A0A1W2PR77 199 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 KLK10O43240 276 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 SUV39H1O43463 412 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 SYNCRIPO60506 623 aaKnown RBP14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 ITGAVP06756 1048 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 ITGB6P18564 788 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 ABCD1P33897 745 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 GRIN1Q05586 938 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 IFRD2Q12894 506 aaPredicted RBP14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 PROX2Q3B8N5 592 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 FYB2Q5VWT5 728 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 TMEM215Q68D42 235 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 IGF2-ASQ6U949 168 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 LSMEM2Q8N112 164 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 CACTINQ8WUQ7 758 aaKnown RBP14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 KCNK16Q96T55 309 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 PLIN2Q99541 437 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 MRPL45Q9BRJ2 306 aaKnown RBP14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 ACE2Q9BYF1 805 aaPredicted RBP14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 B3GNT5Q9BYG0 378 aa14.45□□□□□ -0.1
VCPKMT-201ENST00000395859 MTMR12Q9C0I1 747 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms