RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 O00370 1275 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 XPO1O14980 1071 aaKnown RBP18.91■□□□□ 0.62
CXCL12-204ENST00000395793 GADD45BO75293 160 aaPredicted RBP18.91■□□□□ 0.62
CXCL12-204ENST00000395793 PENKP01210 267 aaPredicted RBP18.91■□□□□ 0.62
CXCL12-204ENST00000395793 CORO1AP31146 461 aaKnown RBP18.91■□□□□ 0.62
CXCL12-204ENST00000395793 PTGER3P43115 390 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 DGKGP49619 791 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 BCAT1P54687 386 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 PREPLQ4J6C6 727 aaPredicted RBP18.91■□□□□ 0.62
CXCL12-204ENST00000395793 PKDCCQ504Y2 493 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 SGO2Q562F6 1265 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 RNF43Q68DV7 783 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 TTI2Q6NXR4 508 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 ARMCX6Q7L4S7 300 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 TMEFF1Q8IYR6 380 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 UBA3Q8TBC4 463 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 TFAP2BQ92481 460 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 DHTKD1Q96HY7 919 aaPredicted RBP18.91■□□□□ 0.62
CXCL12-204ENST00000395793 CNTNAP3BQ96NU0 1288 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 ZSWIM1Q9BR11 485 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 CNTNAP3Q9BZ76 1288 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 CD93Q9NPY3 652 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 MARCH2Q9P0N8 246 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 AGO1Q9UL18 857 aaKnown RBP18.91■□□□□ 0.62
CXCL12-204ENST00000395793 ACACBO00763 2458 aa18.91■□□□□ 0.62
CXCL12-204ENST00000395793 PPP1R3GB7ZBB8 358 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 PSMA7O14818 248 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 GABBR2O75899 941 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 ZBED1O96006 694 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 CALCAP01258 141 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 CD19P15391 556 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 KCNA4P22459 653 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 COG7P83436 770 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 ADIGQ0VDE8 80 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 BST2Q10589 180 aaKnown RBP18.9■□□□□ 0.62
CXCL12-204ENST00000395793 KLHL10Q6JEL2 608 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 TRMT11Q7Z4G4 463 aaKnown RBP18.9■□□□□ 0.62
CXCL12-204ENST00000395793 TADA2BQ86TJ2 420 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 ELOA2Q8IYF1 753 aaPredicted RBP18.9■□□□□ 0.62
CXCL12-204ENST00000395793 PGBD3Q8N328 593 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 LMO3Q8TAP4 145 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 SPACA7Q96KW9 195 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 CEP63Q96MT8 703 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 CDK5RAP1Q96SZ6 601 aaKnown RBP18.9■□□□□ 0.62
CXCL12-204ENST00000395793 CACNA2D2Q9NY47 1150 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 CALCOCO1Q9P1Z2 691 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 CLEC4EQ9ULY5 219 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 RAD54BQ9Y620 910 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 ADAMTS9Q9P2N4 1935 aa18.9■□□□□ 0.62
CXCL12-204ENST00000395793 SLC12A8A0AV02 714 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 WASH3PC4AMC7 463 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 RNF225M0QZC1 329 aaPredicted RBP18.89■□□□□ 0.61
CXCL12-204ENST00000395793 VDRP11473 427 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 NDUFV2P19404 249 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 MORC3Q14149 939 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 NUDT18Q6ZVK8 323 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 DENND1CQ8IV53 801 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 CHPFQ8IZ52 775 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 ARHGAP18Q8N392 663 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 IPO4Q8TEX9 1081 aaKnown RBP18.89■□□□□ 0.61
CXCL12-204ENST00000395793 PIGKQ92643 395 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 GABRG3Q99928 467 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 GTPBP4Q9BZE4 634 aaKnown RBP18.89■□□□□ 0.61
CXCL12-204ENST00000395793 SLC6A17Q9H1V8 727 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 METTL14Q9HCE5 456 aaKnown RBP18.89■□□□□ 0.61
CXCL12-204ENST00000395793 TMEM74BQ9NUR3 256 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 HOOK1Q9UJC3 728 aaKnown RBP18.89■□□□□ 0.61
CXCL12-204ENST00000395793 ZNF510Q9Y2H8 683 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 ATXN2Q99700 1313 aaKnown RBP18.89■□□□□ 0.61
CXCL12-204ENST00000395793 CKAP5Q14008 2032 aa18.89■□□□□ 0.61
CXCL12-204ENST00000395793 MUC22E2RYF6 1773 aaPredicted RBP18.88■□□□□ 0.61
CXCL12-204ENST00000395793 YJEFN3A6XGL0 299 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 C4orf47A7E2U8 309 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 E7ENQ6 273 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 BIN1O00499 593 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 TBXAS1P24557 533 aaPredicted RBP18.88■□□□□ 0.61
CXCL12-204ENST00000395793 MFAP3P55082 362 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 YWHAEP62258 255 aaKnown RBP18.88■□□□□ 0.61
CXCL12-204ENST00000395793 IRX4P78413 519 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 STIM1Q13586 685 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 GEN1Q17RS7 908 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 CCDC40Q4G0X9 1142 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 RSRC2Q7L4I2 434 aaKnown RBP18.88■□□□□ 0.61
CXCL12-204ENST00000395793 LPCAT2Q7L5N7 544 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 ARHGEF19Q8IW93 802 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 FAM217AQ8IXS0 508 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 NELFBQ8WX92 580 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 EDEM1Q92611 657 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 NT5C1BQ96P26 610 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 LSM14BQ9BX40 385 aaKnown RBP18.88■□□□□ 0.61
CXCL12-204ENST00000395793 DCLK3Q9C098 648 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 HESX1Q9UBX0 185 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 CTNND2Q9UQB3 1225 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 SLC27A6Q9Y2P4 619 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 PCDH15Q96QU1 1955 aa18.88■□□□□ 0.61
CXCL12-204ENST00000395793 ASCC3Q8N3C0 2202 aaKnown RBP18.88■□□□□ 0.61
CXCL12-204ENST00000395793 IGHV1OR15-9A0A0B4J2B8 117 aa18.87■□□□□ 0.61
CXCL12-204ENST00000395793 CDX4O14627 284 aaPredicted RBP18.87■□□□□ 0.61
CXCL12-204ENST00000395793 KHNYNO15037 678 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms