RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 LGR5O75473 907 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 CRADDP78560 199 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 ROR2Q01974 943 aaKnown RBP21.37■■□□□ 1.01
CLK3-202ENST00000395066 CLEC4CQ8WTT0 213 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 CLPTM1LQ96KA5 538 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 PDZD7Q9H5P4 517 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 HMX2A2RU54 273 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 SNRPAP09012 282 aaKnown RBP21.37■■□□□ 1.01
CLK3-202ENST00000395066 FAM47CQ5HY64 1035 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 ACOT1Q86TX2 421 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 GALNT15Q8N3T1 639 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.37■■□□□ 1.01
CLK3-202ENST00000395066 IFT43Q96FT9 208 aa21.37■■□□□ 1.01
CLK3-202ENST00000395066 PPARGC1AQ9UBK2 798 aaKnown RBP21.37■■□□□ 1.01
CLK3-202ENST00000395066 SMAPO00193 183 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 PPEF2O14830 753 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 RARBP10826 455 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 TSHRP16473 764 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 AMPD1P23109 780 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 KDSRQ06136 332 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 SLC10A2Q12908 348 aaPredicted RBP21.36■■□□□ 1.01
CLK3-202ENST00000395066 SH3D19Q5HYK7 790 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 TTC30AQ86WT1 665 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 PDCD7Q8N8D1 485 aaKnown RBP21.36■■□□□ 1.01
CLK3-202ENST00000395066 ZNF212Q9UDV6 495 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 BARX2Q9UMQ3 279 aaPredicted RBP21.36■■□□□ 1.01
CLK3-202ENST00000395066 MYO18AQ92614 2054 aaKnown RBP21.36■■□□□ 1.01
CLK3-202ENST00000395066 FZD9O00144 591 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 GABBR2O75899 941 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 KRT37O76014 449 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 ARF4P18085 180 aaPredicted RBP21.36■■□□□ 1.01
CLK3-202ENST00000395066 TMEM132DQ14C87 1099 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 ACAP1Q15027 740 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 AMHR2Q16671 573 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 Q3C1V9 767 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 ZNF534Q76KX8 674 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 PPP1R12CQ9BZL4 782 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 GBA2Q9HCG7 927 aaPredicted RBP21.36■■□□□ 1.01
CLK3-202ENST00000395066 WASF2Q9Y6W5 498 aa21.36■■□□□ 1.01
CLK3-202ENST00000395066 MAP3K7O43318 606 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 GSTA2P09210 222 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 THOC5Q13769 683 aaKnown RBP21.35■■□□□ 1.01
CLK3-202ENST00000395066 PLPPR4Q7Z2D5 763 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 NDUFAF2Q8N183 169 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 SHKBP1Q8TBC3 707 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 KHSRPQ92945 711 aaKnown RBP eCLIP21.35■■□□□ 1.01
CLK3-202ENST00000395066 E2F7Q96AV8 911 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 MRPL45Q9BRJ2 306 aaKnown RBP21.35■■□□□ 1.01
CLK3-202ENST00000395066 KLC2Q9H0B6 622 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 AKT3Q9Y243 479 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 NME7Q9Y5B8 376 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 PAPPA2Q9BXP8 1791 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 A8MXQ7 604 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 B2RBV5 119 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 GAS2O43903 313 aaKnown RBP21.35■■□□□ 1.01
CLK3-202ENST00000395066 C22orf31O95567 290 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 APOEP02649 317 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 TXNP10599 105 aaKnown RBP21.35■■□□□ 1.01
CLK3-202ENST00000395066 ADORA2AP29274 412 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 PGM1P36871 562 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 GMPRP36959 345 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 OLFML1Q6UWY5 402 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 ARHGAP24Q8N264 748 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 PHC3Q8NDX5 983 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 EBF4Q9BQW3 602 aa21.35■■□□□ 1.01
CLK3-202ENST00000395066 CPSF2Q9P2I0 782 aaKnown RBP21.35■■□□□ 1.01
CLK3-202ENST00000395066 I3L4J1 428 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 IRF6O14896 467 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 INSRRP14616 1297 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 RAB27AP51159 221 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 ALDH18A1P54886 795 aaKnown RBP21.34■■□□□ 1.01
CLK3-202ENST00000395066 AQP5P55064 265 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 C16orf46Q6P387 395 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 LCLAT1Q6UWP7 414 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 NUDCD3Q8IVD9 361 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 OTUD5Q96G74 571 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 FAM161BQ96MY7 647 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 MMP19Q99542 508 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 DPP3Q9NY33 737 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 IL1RAPL1Q9NZN1 696 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 CENPFP49454 3210 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 CNMDO75829 334 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 AP1G2O75843 785 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 CYP2F1P24903 491 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 CACNA2D1P54289 1103 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 HDAC4P56524 1084 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 NOL9Q5SY16 702 aaKnown RBP21.34■■□□□ 1.01
CLK3-202ENST00000395066 MAP7D3Q8IWC1 876 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 PGLYRP2Q96PD5 576 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 NT5C1AQ9BXI3 368 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 PNPLA8Q9NP80 782 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 SCN1AP35498 2009 aa21.34■■□□□ 1.01
CLK3-202ENST00000395066 MAGEA13PA6NCF6 341 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 SPAG6O75602 509 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 PRKCHP24723 683 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 SDC4P31431 198 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 NBPF20Q3BBV1 942 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 PPP1R13LQ8WUF5 828 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 ZFAND2BQ8WV99 257 aa21.33■■□□□ 1.01
CLK3-202ENST00000395066 GATA6Q92908 595 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms