RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 TTC13Q8NBP0 860 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 SCAMP5Q8TAC9 235 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 SPPL2BQ8TCT7 592 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 GDPD5Q8WTR4 605 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 PGAP3Q96FM1 320 aaPredicted RBP25.54■■□□□ 1.68
CTF1-202ENST00000395019 LRCH3Q96II8 777 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 HERC2P3Q9BVR0 1158 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 FRMD8P1Q9BZ68 369 aaPredicted RBP25.54■■□□□ 1.68
CTF1-202ENST00000395019 PCDH18Q9HCL0 1135 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 GPATCH2LQ9NWQ4 482 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 NFU1Q9UMS0 254 aa25.54■■□□□ 1.68
CTF1-202ENST00000395019 DAPK3O43293 454 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 LIASO43766 372 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 CST8O60676 142 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 NCAM1P13591 858 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 CPB1P15086 417 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 DPYSL2Q16555 572 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 BSPRYQ5W0U4 402 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 RFX6Q8HWS3 928 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 ATAD1Q8NBU5 361 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 C2orf15Q8WU43 125 aaKnown RBP25.53■■□□□ 1.68
CTF1-202ENST00000395019 POF1BQ8WVV4 589 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 SAMD11Q96NU1 681 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 PGLYRP2Q96PD5 576 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 FUT8Q9BYC5 575 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 ZBP1Q9H171 429 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 MTRRQ9UBK8 725 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 BACE2Q9Y5Z0 518 aa25.53■■□□□ 1.68
CTF1-202ENST00000395019 MTMR11A4FU01 709 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 C2CD2LO14523 706 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 RB1P06400 928 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 ARPP19P56211 112 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 ERVFC1P60507 584 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 KRT17Q04695 432 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 DEUP1Q05D60 604 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 CA9Q16790 459 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 DDX42Q86XP3 938 aaKnown RBP eCLIP25.52■■□□□ 1.68
CTF1-202ENST00000395019 NUP93Q8N1F7 819 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 CCDC185Q8N715 623 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 PIK3R5Q8WYR1 880 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 RNF157Q96PX1 679 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 ZNF670Q9BS34 389 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 MAK16Q9BXY0 300 aaKnown RBP25.52■■□□□ 1.68
CTF1-202ENST00000395019 AP4E1Q9UPM8 1137 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 H3BNC9 293 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 IL4RP24394 825 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 MMRN1Q13201 1228 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 GPM6BQ13491 265 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 TFDP2Q14188 446 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 HDXQ7Z353 690 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 FAM131BQ86XD5 332 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 SLC7A14Q8TBB6 771 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 NKD2Q969F2 451 aaPredicted RBP25.52■■□□□ 1.68
CTF1-202ENST00000395019 CAVIN3Q969G5 261 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 FAF2Q96CS3 445 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 DPH5Q9H2P9 285 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 TTYH1Q9H313 450 aaPredicted RBP25.52■■□□□ 1.68
CTF1-202ENST00000395019 FZD10Q9ULW2 581 aa25.52■■□□□ 1.68
CTF1-202ENST00000395019 DRG1Q9Y295 367 aaKnown RBP25.52■■□□□ 1.68
CTF1-202ENST00000395019 EYSQ5T1H1 3165 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 PLXNA3P51805 1871 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 GAS8O95995 478 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 ECHS1P30084 290 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 L1CAMP32004 1257 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 IRS1P35568 1242 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 LMNB2Q03252 620 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 DDR2Q16832 855 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 SLC8B1Q6J4K2 584 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 RNF19BQ6ZMZ0 732 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 RIN2Q8WYP3 895 aaPredicted RBP25.51■■□□□ 1.67
CTF1-202ENST00000395019 FAM118BQ9BPY3 351 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 DHX35Q9H5Z1 703 aaKnown RBP25.51■■□□□ 1.67
CTF1-202ENST00000395019 ZNF576Q9H609 170 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 DNPEPQ9ULA0 475 aa25.51■■□□□ 1.67
CTF1-202ENST00000395019 APOC4-APOC2K7ER74 178 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 VNN2O95498 520 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 F9P00740 461 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 APOC2P02655 101 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 RPL17P18621 184 aaKnown RBP25.5■■□□□ 1.67
CTF1-202ENST00000395019 GPR15P49685 360 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 DYNLT1P63172 113 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 DSG1Q02413 1049 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 NNTQ13423 1086 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 BYSLQ13895 437 aaKnown RBP25.5■■□□□ 1.67
CTF1-202ENST00000395019 HLTFQ14527 1009 aaKnown RBP eCLIP25.5■■□□□ 1.67
CTF1-202ENST00000395019 PPP1R7Q15435 360 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 KCTD19Q17RG1 926 aaPredicted RBP25.5■■□□□ 1.67
CTF1-202ENST00000395019 SLC35B2Q8TB61 432 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 EDEM1Q92611 657 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 CCDC114Q96M63 670 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 TRIM31Q9BZY9 425 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 PIGVQ9NUD9 493 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 MTMR10Q9NXD2 777 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 IL37Q9NZH6 218 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 SCML2Q9UQR0 700 aa25.5■■□□□ 1.67
CTF1-202ENST00000395019 MAP2K7O14733 419 aa25.49■■□□□ 1.67
CTF1-202ENST00000395019 ADAM12O43184 909 aa25.49■■□□□ 1.67
CTF1-202ENST00000395019 HAPLN1P10915 354 aaPredicted RBP25.49■■□□□ 1.67
CTF1-202ENST00000395019 GBP1P32455 592 aa25.49■■□□□ 1.67
CTF1-202ENST00000395019 GLUD2P49448 558 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms