RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 C6orf222P0C671 652 aaPredicted RBP19.5■□□□□ 0.71
HOXC6-202ENST00000394331 CCR3P51677 355 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 SLC25A3Q00325 362 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 ITGA7Q13683 1181 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 ARID3BQ8IVW6 561 aaPredicted RBP19.5■□□□□ 0.71
HOXC6-202ENST00000394331 RHOT1Q8IXI2 618 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 ATG4CQ96DT6 458 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 PHF12Q96QT6 1004 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 NEURL2Q9BR09 285 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 CDH7Q9ULB5 785 aa19.5■□□□□ 0.71
HOXC6-202ENST00000394331 RGPD3A6NKT7 1758 aaPredicted RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 RGPD4Q7Z3J3 1758 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 GOLGA8RI6L899 631 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 STBD1O95210 358 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 TMED10P49755 219 aaKnown RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 ALDH18A1P54886 795 aaKnown RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 AQP5P55064 265 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 TUBA4AP68366 448 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 GPS1Q13098 491 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 DCDC5Q6ZRR9 648 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 CAPN12Q6ZSI9 719 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 LPCAT2Q7L5N7 544 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 FBXW8Q8N3Y1 598 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 NSUN6Q8TEA1 469 aaKnown RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 CDHR1Q96JP9 859 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 HEMGNQ9BXL5 484 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 FHDC1Q9C0D6 1143 aaPredicted RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 PDLIM7Q9NR12 457 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 CNOT11Q9UKZ1 510 aaKnown RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 FARP1Q9Y4F1 1045 aaPredicted RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 GPC6Q9Y625 555 aaPredicted RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 GOLGA8TH3BQL2 631 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 SNNO75324 88 aaPredicted RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 C8BP07358 591 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 PAX3P23760 479 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 ZNF829Q3KNS6 432 aaPredicted RBP19.49■□□□□ 0.71
HOXC6-202ENST00000394331 NIPAL1Q6NVV3 410 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 SLC2A7Q6PXP3 512 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 CRLF3Q8IUI8 442 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 SHKBP1Q8TBC3 707 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 RANBP9Q96S59 729 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 FAM213AQ9BRX8 229 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 PRDM16Q9HAZ2 1276 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 PCDH9Q9HC56 1237 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 MKS1Q9NXB0 559 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 APPL1Q9UKG1 709 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 PCDHB2Q9Y5E7 798 aa19.49■□□□□ 0.71
HOXC6-202ENST00000394331 MEI4A8MW99 385 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 KCNA2P16389 499 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 HMOX2P30519 316 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 BST1Q10588 318 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 WDR44Q5JSH3 913 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 SWSAP1Q6NVH7 229 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 DCLRE1AQ6PJP8 1040 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 APBB2Q92870 758 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 SMYD3Q9H7B4 428 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 VPS45Q9NRW7 570 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 RIPK3Q9Y572 518 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 PROSCO94903 275 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 UNGP13051 313 aaPredicted RBP19.48■□□□□ 0.71
HOXC6-202ENST00000394331 STT3AP46977 705 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 SOX10P56693 466 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 HP1BP3Q5SSJ5 553 aaPredicted RBP19.48■□□□□ 0.71
HOXC6-202ENST00000394331 DEPDC1Q5TB30 811 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 C15orf39Q6ZRI6 1047 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 MCOLN2Q8IZK6 566 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 E2F7Q96AV8 911 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 CNBD2Q96M20 576 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 ACAP3Q96P50 834 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 ARHGAP28Q9P2N2 729 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 EXTL3O43909 919 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 OAZ1P54368 228 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 ZNF280AP59817 542 aaPredicted RBP19.48■□□□□ 0.71
HOXC6-202ENST00000394331 INAQ16352 499 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 ZFP1Q6P2D0 407 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 GLIS1Q8NBF1 620 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 SERAC1Q96JX3 654 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 DHRS1Q96LJ7 313 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 KCNK16Q96T55 309 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 KLF6Q99612 283 aaPredicted RBP19.48■□□□□ 0.71
HOXC6-202ENST00000394331 ADAM33Q9BZ11 813 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 JPH1Q9HDC5 661 aaPredicted RBP19.48■□□□□ 0.71
HOXC6-202ENST00000394331 PCDHGB4Q9UN71 923 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 PCDHGB5Q9Y5G0 923 aa19.48■□□□□ 0.71
HOXC6-202ENST00000394331 H0YJX3 145 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 EIF2S1P05198 315 aaKnown RBP19.47■□□□□ 0.71
HOXC6-202ENST00000394331 OCM2P0CE71 109 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 OCMP0CE72 109 aaPredicted RBP19.47■□□□□ 0.71
HOXC6-202ENST00000394331 UBAP2LQ14157 1087 aaKnown RBP19.47■□□□□ 0.71
HOXC6-202ENST00000394331 ADGRE1Q14246 886 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 TSPAN14Q8NG11 270 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 CAMKK2Q96RR4 588 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 PI4K2AQ9BTU6 479 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 NUF2Q9BZD4 464 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 XPNPEP1Q9NQW7 623 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 CYP26B1Q9NR63 512 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 SEPT9Q9UHD8 586 aaPredicted RBP19.47■□□□□ 0.71
HOXC6-202ENST00000394331 TRIM17Q9Y577 477 aa19.47■□□□□ 0.71
HOXC6-202ENST00000394331 CLASP2O75122 1294 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms