RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 NCAPHQ15003 741 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 TRIP4Q15650 581 aaPredicted RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 FKBP15Q5T1M5 1219 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 CAVIN1Q6NZI2 390 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 TMEM110Q86TL2 294 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 FMNL3Q8IVF7 1028 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 SCUBE3Q8IX30 993 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 LSM14BQ9BX40 385 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 MIS12Q9H081 205 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 LHX5Q9H2C1 402 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 DEC1Q9P2X7 70 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 LIMA1Q9UHB6 759 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 CYTH4Q9UIA0 394 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 FHOD1Q9Y613 1164 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 LRRC10BA6NIK2 292 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 CACNG3O60359 315 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 LILRB5O75023 590 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 TULP3O75386 442 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 LMNAP02545 664 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 PNMA6AP0CW24 399 aaPredicted RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 TYRP14679 529 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 CDK11BP21127 795 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 KRT9P35527 623 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 CHKAP35790 457 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 TNFRSF4P43489 277 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 HARS2P49590 506 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 COPB1P53618 953 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 MESP2Q0VG99 397 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 PDCLQ13371 301 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 ANO6Q4KMQ2 910 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 TPGS1Q6ZTW0 290 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 BEND5Q7L4P6 421 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 ASCL5Q7RTU5 278 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 SLC47A2Q86VL8 602 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 PHTF2Q8N3S3 785 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 NAT16Q8N8M0 369 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 RPLP0P6Q8NHW5 317 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 USP33Q8TEY7 942 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 ACDQ96AP0 544 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 XPO6Q96QU8 1125 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 BPIFA3Q9BQP9 254 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 TRIM62Q9BVG3 475 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 BBS2Q9BXC9 721 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 STK33Q9BYT3 514 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 SFMBT1Q9UHJ3 866 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 AGO1Q9UL18 857 aaKnown RBP12.37□□□□□ -0.43
RFC4-202ENST00000392481 SLC8A2Q9UPR5 921 aa12.37□□□□□ -0.43
RFC4-202ENST00000392481 KIAA1549LQ6ZVL6 1849 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 LGALS16A8MUM7 142 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 E5RJQ4 531 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 NEDD8-MDP1E9PL57 170 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 PAPSS1O43252 624 aaPredicted RBP12.36□□□□□ -0.43
RFC4-202ENST00000392481 FYNP06241 537 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 MRPS21P82921 87 aaKnown RBP12.36□□□□□ -0.43
RFC4-202ENST00000392481 KDSRQ06136 332 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 C2orf27AQ580R0 203 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 NUDT18Q6ZVK8 323 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 SYT13Q7L8C5 426 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 CPXM2Q8N436 756 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 WDTC1Q8N5D0 677 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 CAMKK1Q8N5S9 505 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 FAM149B1Q96BN6 582 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 GANQ9H2C0 597 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 HSD3B7Q9H2F3 369 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 DNAJC17Q9NVM6 304 aaKnown RBP12.36□□□□□ -0.43
RFC4-202ENST00000392481 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
RFC4-202ENST00000392481 CCDC163A0A0D9SF12 145 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 TBC1D3BA6NDS4 549 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 F8VZ95 297 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 LATS1O95835 1130 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
RFC4-202ENST00000392481 NCAM1P13591 858 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 PTMSP20962 102 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 FNTBP49356 437 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 SEC13P55735 322 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 SNX16P57768 344 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 RING1Q06587 406 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 DMC1Q14565 340 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 HSF5Q4G112 596 aaPredicted RBP12.35□□□□□ -0.43
RFC4-202ENST00000392481 GRAMD4Q6IC98 578 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 LONP2Q86WA8 852 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 PASD1Q8IV76 773 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 SFTPA1Q8IWL2 248 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 FAM217AQ8IXS0 508 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 TERB1Q8NA31 727 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 PPP1R13BQ96KQ4 1090 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 CPXM1Q96SM3 734 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 EPC1Q9H2F5 836 aa12.35□□□□□ -0.43
RFC4-202ENST00000392481 FAM207AQ9NSI2 230 aaPredicted RBP12.35□□□□□ -0.43
RFC4-202ENST00000392481 SIK3Q9Y2K2 1263 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms