RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PNPLA1Q8N8W4 532 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 ATL2Q8NHH9 583 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 PRR11Q96HE9 360 aaPredicted RBP1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 HES6Q96HZ4 224 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 URB1-AS1Q96HZ7 61 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 NODALQ96S42 347 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 P2RX7Q99572 595 aaKnown RBP1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 TRIM5Q9C035 493 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 EGLN1Q9GZT9 426 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 MS4A7Q9GZW8 240 aaPredicted RBP1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 AAMDCQ9H7C9 122 aa1.79□□□□□ -2.12
RNU6-239P-201ENST00000390990 SPATA31A1Q5TZJ5 1347 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 A0A1B0GVT2 93 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 INAFM1C9JVW0 142 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 SRGAP2O75044 1071 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 USP12O75317 370 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 TBX6O95947 436 aaPredicted RBP1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 MBPP02686 304 aaPredicted RBP1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 THP07101 528 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 HGFP14210 728 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 TFEBP19484 476 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 KCNJ4P48050 445 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 VEGFCP49767 419 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 MTHFSP49914 203 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 CTBP1Q13363 440 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 DLGAP5Q15398 846 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 TAF7LQ5H9L4 462 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 ADAM5Q6NVV9 412 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 KCTD20Q7Z5Y7 419 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 CTU1Q7Z7A3 348 aaKnown RBP1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 FAM71DQ8N9W8 422 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 CTCFLQ8NI51 663 aaPredicted RBP1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 MRGPRX1Q96LB2 322 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 C1QTNF4Q9BXJ3 329 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 PUS7LQ9H0K6 701 aaKnown RBP1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 RETREG1Q9H6L5 497 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 TRIM36Q9NQ86 728 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 SIRT3Q9NTG7 399 aaPredicted RBP1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 SLC5A4Q9NY91 659 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 CPA4Q9UI42 421 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 DTX4Q9Y2E6 619 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 HEMK1Q9Y5R4 338 aaPredicted RBP1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 PTGDR2Q9Y5Y4 395 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 MRFAP1Q9Y605 127 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 CDY1Q9Y6F8 540 aa1.78□□□□□ -2.12
RNU6-239P-201ENST00000390990 WDR81Q562E7 1941 aa1.78□□□□□ -2.13
RNU6-239P-201ENST00000390990 COL2A1P02458 1487 aaPredicted RBP1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 BECN2A8MW95 431 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 TMEM233B4DJY2 109 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 CD3EAPO15446 510 aaKnown RBP1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 CA12O43570 354 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 IFNA2P01563 188 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 CPA1P15085 419 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 GALNSP34059 522 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 JAK3P52333 1124 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 WDR5P61964 334 aaKnown RBP1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 KRT85P78386 507 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 ROR2Q01974 943 aaKnown RBP1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 PGM5Q15124 567 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 KRTAP13-3Q3SY46 172 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 C6orf10Q5SRN2 563 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 LCE3EQ5T5B0 92 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 SYDE2Q5VT97 1194 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZDHHC24Q6UX98 284 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 USP45Q70EL2 814 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 MIER2Q8N344 545 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 C11orf44Q8N8P7 122 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 ARL14EPQ8N8R7 260 aaPredicted RBP1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 C7orf57Q8NEG2 295 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 PLBD2Q8NHP8 589 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 ELOVL1Q9BW60 279 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 DCLK3Q9C098 648 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 ISCUQ9H1K1 167 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 SARS2Q9NP81 518 aaKnown RBP1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 TCF7L2Q9NQB0 619 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 VPS45Q9NRW7 570 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 RIMKLBQ9ULI2 386 aa1.77□□□□□ -2.13
RNU6-239P-201ENST00000390990 SHTN1A0MZ66 631 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 OR6C75A6NL08 312 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 A8MVJ9 347 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 GABRDO14764 452 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 KRT36O76013 467 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 RASAL1O95294 804 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 VIL1P09327 827 aaKnown RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 GM2AP17900 193 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 ADRA1DP25100 572 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 CNGA1P29973 690 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 SOX2P48431 317 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 GATMP50440 423 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 CRIP2P52943 208 aaPredicted RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 ABATP80404 500 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 TXNL4AP83876 142 aaKnown RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 GAD2Q05329 585 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 ZRSR1Q15695 479 aaKnown RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 CCDC157Q569K6 752 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 KIAA1755Q5JYT7 1200 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 LMBRD2Q68DH5 695 aaPredicted RBP1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 WBP2NLQ6ICG8 309 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 KRT26Q7Z3Y9 468 aa1.76□□□□□ -2.13
RNU6-239P-201ENST00000390990 MYPOPQ86VE0 399 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms