RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 VWA5AO00534 786 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MDM4O15151 490 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC16A3O15427 465 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZSCAN9O15535 394 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PRPF4O43172 522 aaKnown RBP eCLIP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TEX33O43247 280 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CCP110O43303 1012 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RAD21O60216 631 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZEB2O60315 1214 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MSCO60682 206 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PRAMEF4O60810 478 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 OPHN1O60890 802 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 HIP1RO75146 1068 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 KRT33AO76009 404 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SUN1O94901 812 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PRSS23O95084 383 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 KIF20AO95235 890 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PDE8BO95263 885 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 BRD1O95696 1058 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 IFNA2P01563 188 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 LCATP04180 440 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 AMY2AP04746 511 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GNAI2P04899 355 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PRKCBP05771 671 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ASNSP08243 561 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 LTA4HP09960 611 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CGB3P0DN86 165 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RAP2AP10114 183 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ACADMP11310 421 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FCER1AP12319 257 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FDPSP14324 419 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF44P15621 663 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RPS2P15880 293 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CPEP16870 476 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CD53P19397 219 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 AMY2BP19961 511 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 XPAP23025 273 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 EIF4BP23588 611 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ITGB8P26012 769 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MARK3P27448 753 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GDF1P27539 372 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CD6P30203 668 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CHRNB4P30926 498 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GBP2P32456 591 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MCM4P33991 863 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CRHR1P34998 444 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PMELP40967 661 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ALDH1A3P47895 512 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PSMD8P48556 350 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FNTBP49356 437 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ST13P50502 369 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RASSF2P50749 326 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CLCN2P51788 898 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF143P52747 638 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 HK3P52790 923 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GFRA1P56159 465 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NRG3P56975 720 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 RIPK4P57078 832 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GPR85P60893 370 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GNB1P62873 340 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NOMO3P69849 1222 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GABREP78334 506 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CDC42EP1Q00587 391 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MC2RQ01718 297 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MEF2AQ02078 507 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TAP2Q03519 686 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TLE1Q04724 770 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CLCQ05315 142 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GAD2Q05329 585 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 LRRC63Q05C16 580 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM160A1Q05DH4 1040 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CD69Q07108 199 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PIGFQ07326 219 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 SP140Q13342 867 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 GRAPQ13588 217 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 DHX34Q14147 1143 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM187Q14656 261 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 KCNB1Q14721 858 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 MYBPC3Q14896 1274 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NOMO1Q15155 1222 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CPEB4Q17RY0 729 aaKnown RBP eCLIP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PRSS53Q2L4Q9 553 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 AMZ1Q400G9 498 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CD300EQ496F6 205 aaPredicted RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TPRNQ4KMQ1 711 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 AWAT1Q58HT5 328 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 C19orf54Q5BKX5 351 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FSCBQ5H9T9 825 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 NOMO2Q5JPE7 1267 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM47AQ5JRC9 791 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TTC38Q5R3I4 469 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 C6orf10Q5SRN2 563 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CATSPEREQ5SY80 951 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 CELF3Q5SZQ8 465 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 FNBP1LQ5T0N5 605 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TREML2Q5T2D2 321 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 L1TD1Q5T7N2 865 aaKnown RBP-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM164Q5U3C3 297 aa-0.24□□□□□ -2.45
TRAJ28-201ENST00000390509 PRAMEF9Q5VWM5 478 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms