RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GOLGA6BA6NDN3 693 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 MYMKA6NI61 221 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 PLAUP00749 431 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 GOLGA6DP0CG33 693 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 ATICP31939 592 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 DAG1Q14118 895 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 ABLIM2Q6H8Q1 611 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 CRTC1Q6UUV9 634 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 RNF44Q7L0R7 432 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 C16orf71Q8IYS4 520 aaPredicted RBP3.97□□□□□ -1.77
TRAV40-201ENST00000390467 PHKBQ93100 1093 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 TRMT61AQ96FX7 289 aaKnown RBP3.97□□□□□ -1.77
TRAV40-201ENST00000390467 ZFYVE19Q96K21 471 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 CINPQ9BW66 212 aaPredicted RBP3.97□□□□□ -1.77
TRAV40-201ENST00000390467 ADGRE3Q9BY15 652 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 UNKQ9C0B0 810 aaKnown RBP3.97□□□□□ -1.77
TRAV40-201ENST00000390467 NUAK2Q9H093 628 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 HEYLQ9NQ87 328 aaPredicted RBP3.97□□□□□ -1.77
TRAV40-201ENST00000390467 ABHD10Q9NUJ1 306 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 GOLGA6AQ9NYA3 693 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 SNX13Q9Y5W8 968 aa3.97□□□□□ -1.77
TRAV40-201ENST00000390467 TTBK1Q5TCY1 1321 aaPredicted RBP3.96□□□□□ -1.77
TRAV40-201ENST00000390467 SPATA31A1Q5TZJ5 1347 aa3.96□□□□□ -1.77
TRAV40-201ENST00000390467 SLC22A23A1A5C7 686 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 FGF2P09038 288 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 SNHG28P0DPA3 235 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 ATF3P18847 181 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 HOXA7P31268 230 aaPredicted RBP3.96□□□□□ -1.78
TRAV40-201ENST00000390467 IDUAP35475 653 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 PIK3CBP42338 1070 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 JAK3P52333 1124 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 HSF1Q00613 529 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 GPS1Q13098 491 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 TWIST1Q15672 202 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 PFKFB3Q16875 520 aaPredicted RBP3.96□□□□□ -1.78
TRAV40-201ENST00000390467 CRELD2Q6UXH1 353 aaPredicted RBP3.96□□□□□ -1.78
TRAV40-201ENST00000390467 ZNF793Q6ZN11 406 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 KRT28Q7Z3Y7 464 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 ZDHHC17Q8IUH5 632 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 SDR16C5Q8N3Y7 309 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 ARFGAP1Q8N6T3 406 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 IQCDQ96DY2 449 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 CAMK1GQ96NX5 476 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 GATA5Q9BWX5 397 aaPredicted RBP3.96□□□□□ -1.78
TRAV40-201ENST00000390467 PNPLA8Q9NP80 782 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 PRDM11Q9NQV5 511 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 GJB4Q9NTQ9 266 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 ARL8BQ9NVJ2 186 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 KLHL42Q9P2K6 505 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 VPS4AQ9UN37 437 aa3.96□□□□□ -1.78
TRAV40-201ENST00000390467 FAM90A10PA6NDY2 464 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 PRYO14603 147 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 KPNA5O15131 536 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 IL18RAPO95256 599 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 TSHRP16473 764 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 HOXB6P17509 224 aaKnown RBP3.95□□□□□ -1.78
TRAV40-201ENST00000390467 RPL17P18621 184 aaKnown RBP3.95□□□□□ -1.78
TRAV40-201ENST00000390467 SCP2P22307 547 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 MST1P26927 711 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 CPA2P48052 419 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 NANOS2P60321 138 aaKnown RBP3.95□□□□□ -1.78
TRAV40-201ENST00000390467 ZNF543Q08ER8 600 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 GAB1Q13480 694 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 STIM1Q13586 685 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 KCNJ12Q14500 433 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 EARS2Q5JPH6 523 aaKnown RBP3.95□□□□□ -1.78
TRAV40-201ENST00000390467 FAM90A2PQ658T7 463 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 RUSC1-AS1Q66K80 236 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 UBE2Q1Q7Z7E8 422 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 WDR75Q8IWA0 830 aaKnown RBP3.95□□□□□ -1.78
TRAV40-201ENST00000390467 RNF152Q8N8N0 203 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 NSMCE1Q8WV22 266 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 WASF1Q92558 559 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 LRRC46Q96FV0 321 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 TRMOQ9BU70 441 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 ZCWPW1Q9H0M4 648 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 NUP62CLQ9H1M0 184 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 TMEM8AQ9HCN3 771 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 DDX21Q9NR30 783 aaKnown RBP eCLIP3.95□□□□□ -1.78
TRAV40-201ENST00000390467 POT1Q9NUX5 634 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 ZNF580Q9UK33 172 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 HS3ST3B1Q9Y662 390 aa3.95□□□□□ -1.78
TRAV40-201ENST00000390467 CD8B2A6NJW9 211 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 CLCA1A8K7I4 914 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 RHPN2P1A8MT19 583 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 H3BNX3 289 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 THAP12O43422 761 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 PQBP1O60828 265 aaKnown RBP3.94□□□□□ -1.78
TRAV40-201ENST00000390467 ST6GAL1P15907 406 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 DRD1P21728 446 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 RPS6KB1P23443 525 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 NDUFS1P28331 727 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 CCKBRP32239 447 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 ME1P48163 572 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 HTR6P50406 440 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 RBM44Q6ZP01 1051 aaKnown RBP3.94□□□□□ -1.78
TRAV40-201ENST00000390467 C9orf47Q6ZRZ4 202 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 COLCA1Q6ZS62 124 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 PELI3Q8N2H9 469 aa3.94□□□□□ -1.78
TRAV40-201ENST00000390467 TMEM45AQ9NWC5 275 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms