RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 PDE4DIPQ5VU43 2346 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TANC1Q9C0D5 1861 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TRAV20A0A0B4J274 112 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PRODHO43272 600 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PENKP01210 267 aaPredicted RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 ATP2A2P16615 1042 aaKnown RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TRIM21P19474 475 aaKnown RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CD247P20963 164 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 ATP5DP30049 168 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PRCPP42785 496 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 DRG2P55039 364 aaKnown RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PCBP1Q15365 356 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 FAM187BQ17R55 369 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 BMT2Q1RMZ1 405 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 ZC2HC1CQ53FD0 456 aaPredicted RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 SH2D4BQ5SQS7 431 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 KLHL10Q6JEL2 608 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 IGF2-ASQ6U949 168 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 LRRC8DQ7L1W4 858 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CATSPER4Q7RTX7 472 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PIGWQ7Z7B1 504 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CPLX4Q7Z7G2 160 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CDH24Q86UP0 819 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 NELFCDQ8IXH7 590 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 SYCP3Q8IZU3 236 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 ADSSL1Q8N142 457 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 GUF1Q8N442 669 aaKnown RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 ADCY4Q8NFM4 1077 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 SLC7A14Q8TBB6 771 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 ACTRT1Q8TDG2 376 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 SCFD1Q8WVM8 642 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 ATXN2LQ8WWM7 1075 aaKnown RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 KCNN1Q92952 543 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TLCD1Q96CP7 247 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 IER2Q9BTL4 223 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 STRA6Q9BX79 667 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 MRPL4Q9BYD3 311 aaKnown RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TRIM7Q9C029 511 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 RAB17Q9H0T7 212 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CENPHQ9H3R5 247 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PLEKHA4Q9H4M7 779 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 SUDS3Q9H7L9 328 aaPredicted RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TMEM206Q9H813 350 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 MINDY3Q9H8M7 445 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 PRDM5Q9NQX1 630 aaPredicted RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CTTNBP2NLQ9P2B4 639 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 CIDEBQ9UHD4 219 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TTC7AQ9ULT0 858 aaPredicted RBP7.86□□□□□ -1.15
TRBV28-201ENST00000390400 LRRC42Q9Y546 428 aa7.86□□□□□ -1.15
TRBV28-201ENST00000390400 TET1Q8NFU7 2136 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 CNTNAP2Q9UHC6 1331 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 SCN5AQ14524 2016 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 BLACEA4D250 179 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 H0YGN5 161 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 ACKR2O00590 384 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 PLD2O14939 933 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 HNRNPDLO14979 420 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 KIAA0355O15063 1070 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 COQ9O75208 318 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 PPFIA2O75334 1257 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 CSDE1O75534 798 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 GFPT2O94808 682 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 LRIG2O94898 1065 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 HEXIM1O94992 359 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 ANP32DO95626 131 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 AGTP01019 485 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 PIGRP01833 764 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 PABPC1P11940 636 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 ACADSP16219 412 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 DRD4P21917 467 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 CYP2C18P33260 490 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 LIG4P49917 911 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 GUCY1A3Q02108 690 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 PRPF4BQ13523 1007 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 KNOP1Q1ED39 458 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 VWA3BQ502W6 1294 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 ANKRD39Q53RE8 183 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 FBXO47Q5MNV8 452 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 HIBCHQ6NVY1 386 aaPredicted RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 TSHZ1Q6ZSZ6 1077 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 TAOK1Q7L7X3 1001 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 TRPM8Q7Z2W7 1104 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 STRA8Q7Z7C7 330 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 DDX42Q86XP3 938 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 RAVER1Q8IY67 606 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 C7orf61Q8IZ16 206 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 USP38Q8NB14 1042 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 NELFBQ8WX92 580 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 P2RX5Q93086 422 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 PPP1R14AQ96A00 147 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 KREMEN1Q96MU8 473 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 RUNDC3BQ96NL0 473 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 TMEM237Q96Q45 408 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 NAP1L3Q99457 506 aaPredicted RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 TSC22D3Q99576 134 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 TSG101Q99816 390 aa7.85□□□□□ -1.15
TRBV28-201ENST00000390400 TARS2Q9BW92 718 aaKnown RBP7.85□□□□□ -1.15
TRBV28-201ENST00000390400 FZD8Q9H461 694 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms