RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CCNT2O60583 730 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 MOSPD3O75425 235 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 SGPL1O95470 568 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 NDST3O95803 873 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 KRT18P05783 430 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 TMIGD3P0DMS9 266 aaPredicted RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 HARSP12081 509 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 IDEP14735 1019 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 MATN1P21941 496 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 MMP8P22894 467 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 ATP5F1P24539 256 aaPredicted RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 EEF1GP26641 437 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 MPGP29372 298 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 PBX1P40424 430 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 ABCG1P45844 678 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 HTR3AP46098 478 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 COPB1P53618 953 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 HSF1Q00613 529 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 BTKQ06187 659 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 NSUN2Q08J23 767 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 GPS1Q13098 491 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 PMS2P11Q13670 270 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 TRIP6Q15654 476 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 TMEM119Q4V9L6 283 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 MTX3Q5HYI7 312 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 TMTC4Q5T4D3 741 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 PAPD7Q5XG87 772 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 ZNF626Q68DY1 528 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 ACSM6Q6P461 480 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 SERPINA13PQ6UXR4 307 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 RANBP10Q6VN20 620 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 YTHDF3Q7Z739 585 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 PIP4P1Q86T03 277 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 CCDC150Q8NCX0 1101 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 GLMPQ8WWB7 406 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 MAP4K1Q92918 833 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 RPL36ALQ969Q0 106 aaKnown RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 CCDC136Q96JN2 1154 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 ZNF778Q96MU6 729 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 FAM118BQ9BPY3 351 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 CINPQ9BW66 212 aaPredicted RBP2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 PCDHAC1Q9H158 963 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 SAP30LQ9HAJ7 183 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 GJB4Q9NTQ9 266 aa2.72□□□□□ -1.97
RNU6-541P-201ENST00000384709 C16orf96A6NNT2 1141 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CLIC1O00299 241 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 FYB1O15117 783 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CTIFO43310 598 aaKnown RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 TOP3BO95985 862 aaKnown RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CYP2D6P10635 497 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 HOXD12P35452 270 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 HSPA7P48741 367 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZNF84P51523 738 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CCDC15Q0P6D6 951 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SLC14A1Q13336 389 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 PICALMQ13492 652 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 LAMB3Q13751 1172 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 MFSD13AQ14CX5 517 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SEC23BQ15437 767 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 RAB30Q15771 203 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SRSF7Q16629 238 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 LONRF1Q17RB8 773 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SUPT20HL1Q3ZLR7 823 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 KSR2Q6VAB6 950 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 PIK3AP1Q6ZUJ8 805 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 TOGARAM2Q6ZUX3 1019 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SKAP1Q86WV1 359 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CCAR1Q8IX12 1150 aaKnown RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 LAS2Q8IYD9 372 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 FSTL5Q8N475 847 aaPredicted RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CCDC33Q8N5R6 958 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 Q8N9P0 234 aaPredicted RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 C16orf52Q8NHV5 167 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SCARB1Q8WTV0 552 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 RSC1A1Q92681 617 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 LRRC46Q96FV0 321 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 PRR11Q96HE9 360 aaPredicted RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 ZNF845Q96IR2 970 aaPredicted RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CCDC138Q96M89 665 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 MYD88Q99836 296 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 AGO4Q9HCK5 861 aaKnown RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 CHST12Q9NRB3 414 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 HELLSQ9NRZ9 838 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 ABHD10Q9NUJ1 306 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SLC52A1Q9NWF4 448 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 FNIP2Q9P278 1114 aa2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 SIRT4Q9Y6E7 314 aaPredicted RBP2.71□□□□□ -1.98
RNU6-541P-201ENST00000384709 FAM234BA2RU67 622 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 GOLGA6L3A6NEY3 463 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 M0QZQ0 153 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 DSCR3O14972 297 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 CA12O43570 354 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 TLR2O60603 784 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 GCATO75600 419 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 VIPP01282 170 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 NBPF7P0C2Y1 421 aaPredicted RBP2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 PECAM1P16284 738 aaPredicted RBP2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 GALNSP34059 522 aa2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 IGHMBP2P38935 993 aaKnown RBP2.7□□□□□ -1.98
RNU6-541P-201ENST00000384709 CDK7P50613 346 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms