RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 B3GNT9Q6UX72 402 aa15.48■□□□□ 0.07
CTNS-202ENST00000381870 TPTE2Q6XPS3 522 aa15.48■□□□□ 0.07
CTNS-202ENST00000381870 CPNE9Q8IYJ1 553 aa15.48■□□□□ 0.07
CTNS-202ENST00000381870 ADCY4Q8NFM4 1077 aa15.48■□□□□ 0.07
CTNS-202ENST00000381870 RANBP9Q96S59 729 aa15.48■□□□□ 0.07
CTNS-202ENST00000381870 DDX56Q9NY93 547 aaKnown RBP15.48■□□□□ 0.07
CTNS-202ENST00000381870 ZBTB14O43829 449 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
CTNS-202ENST00000381870 ADAM23O75077 832 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 FGF3P11487 239 aaPredicted RBP15.47■□□□□ 0.07
CTNS-202ENST00000381870 ARRB2P32121 409 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 CRHR1P34998 444 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 ALDH3B2P48448 385 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 GRAPQ13588 217 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 TRIM72Q6ZMU5 477 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 GRAPLQ8TC17 118 aaPredicted RBP15.47■□□□□ 0.07
CTNS-202ENST00000381870 HAUS8Q9BT25 410 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 PNPLA8Q9NP80 782 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 MKS1Q9NXB0 559 aa15.47■□□□□ 0.07
CTNS-202ENST00000381870 TMX2-CTNND1H3BSU7 103 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 XPOTO43592 962 aaKnown RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 FAM189A1O60320 539 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 NDUFB10O96000 172 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 PSMC3P17980 439 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 XRCC1P18887 633 aaPredicted RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 MMP8P22894 467 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 CLCN2P51788 898 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 NDST2P52849 883 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 EIF3EP60228 445 aaKnown RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 YWHAZP63104 245 aaKnown RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 LGSNQ5TDP6 509 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 DNAJC24Q6P3W2 148 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 KBTBD7Q8WVZ9 684 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 COX4I2Q96KJ9 171 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 FAM213AQ9BRX8 229 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 MAN1C1Q9NR34 630 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 HOMER2Q9NSB8 354 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 SPATA7Q9P0W8 599 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 STK39Q9UEW8 545 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 ZC3H7BQ9UGR2 993 aaKnown RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 EBF1Q9UH73 591 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 EXOC7Q9UPT5 735 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 FUOMA2VDF0 154 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 SPAG6O75602 509 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 ZBED1O96006 694 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 ACAT1P24752 427 aaKnown RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 IL1R2P27930 398 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 THOP1P52888 689 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 SLC5A3P53794 718 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 SNRPFP62306 86 aaKnown RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 NFIAQ12857 509 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 FLOT2Q14254 428 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 KCNJ11Q14654 390 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 NRF1Q16656 503 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 AOC3Q16853 763 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 WDR44Q5JSH3 913 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 FAM102BQ5T8I3 360 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 BBS12Q6ZW61 710 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 MIER3Q7Z3K6 550 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 CATSPER1Q8NEC5 780 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 NLRP7Q8WX94 980 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 VPS50Q96JG6 964 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 SORT1Q99523 831 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 DCUN1D5Q9BTE7 237 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 KLC2Q9H0B6 622 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 STN1Q9H668 368 aaKnown RBP15.46■□□□□ 0.07
CTNS-202ENST00000381870 ARMC7Q9H6L4 198 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 CAAP1Q9H8G2 361 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 COQ6Q9Y2Z9 468 aa15.46■□□□□ 0.07
CTNS-202ENST00000381870 GREB1LQ9C091 1923 aaPredicted RBP15.46■□□□□ 0.06
CTNS-202ENST00000381870 ZNF195O14628 629 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 AIM2O14862 343 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 ZC3H11AO75152 810 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTNS-202ENST00000381870 HLA-DRAP01903 254 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 EPHA3P29320 983 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 WNT7BP56706 349 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 GTF2IP78347 998 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 ZNF362Q5T0B9 420 aaPredicted RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 FASTKD5Q7L8L6 764 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 CHERPQ8IWX8 916 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 RNF148Q8N7C7 305 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 PPP1R10Q96QC0 940 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 ST6GALNAC4Q9H4F1 302 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 POPDC2Q9HBU9 364 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 APOBEC3GQ9HC16 384 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 TBC1D22BQ9NU19 505 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 SLC38A7Q9NVC3 462 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 EMCNQ9ULC0 261 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 TCRBV5S1A1TA0A578 114 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 WDR46O15213 610 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 KLHL41O60662 606 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 STAMBPO95630 424 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 PTPN1P18031 435 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 NUDT2P50583 147 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 STAT2P52630 851 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 CDH15P55291 814 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 FAXCQ5TGI0 409 aa15.45■□□□□ 0.06
CTNS-202ENST00000381870 TRMT10BQ6PF06 316 aaKnown RBP15.45■□□□□ 0.06
CTNS-202ENST00000381870 NPNTQ6UXI9 565 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms