RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ZC2HC1CQ53FD0 456 aaPredicted RBP4□□□□□ -1.77
SMC6-202ENST00000381272 GLE1Q53GS7 698 aaKnown RBP4□□□□□ -1.77
SMC6-202ENST00000381272 ALS2CLQ60I27 953 aa4□□□□□ -1.77
SMC6-202ENST00000381272 SLFN12LQ6IEE8 588 aa4□□□□□ -1.77
SMC6-202ENST00000381272 SDE2Q6IQ49 451 aa4□□□□□ -1.77
SMC6-202ENST00000381272 EMBQ6PCB8 327 aa4□□□□□ -1.77
SMC6-202ENST00000381272 FOXR2Q6PJQ5 311 aa4□□□□□ -1.77
SMC6-202ENST00000381272 EPM2AIP1Q7L775 607 aaPredicted RBP4□□□□□ -1.77
SMC6-202ENST00000381272 DDX42Q86XP3 938 aaKnown RBP eCLIP4□□□□□ -1.77
SMC6-202ENST00000381272 KIF18BQ86Y91 864 aa4□□□□□ -1.77
SMC6-202ENST00000381272 PALM2Q8IXS6 379 aa4□□□□□ -1.77
SMC6-202ENST00000381272 ZC3H3Q8IXZ2 948 aaKnown RBP4□□□□□ -1.77
SMC6-202ENST00000381272 IFT20Q8IY31 132 aa4□□□□□ -1.77
SMC6-202ENST00000381272 FUKQ8N0W3 1084 aa4□□□□□ -1.77
SMC6-202ENST00000381272 SPICE1Q8N0Z3 855 aa4□□□□□ -1.77
SMC6-202ENST00000381272 SYT2Q8N9I0 419 aaPredicted RBP4□□□□□ -1.77
SMC6-202ENST00000381272 ERMNQ8TAM6 284 aa4□□□□□ -1.77
SMC6-202ENST00000381272 PIGOQ8TEQ8 1089 aa4□□□□□ -1.77
SMC6-202ENST00000381272 TAF4BQ92750 862 aa4□□□□□ -1.77
SMC6-202ENST00000381272 NINJ1Q92982 152 aa4□□□□□ -1.77
SMC6-202ENST00000381272 CAVIN3Q969G5 261 aa4□□□□□ -1.77
SMC6-202ENST00000381272 ZNF622Q969S3 477 aaKnown RBP eCLIP4□□□□□ -1.774e-7■■■□□ 16.3
SMC6-202ENST00000381272 LENG9Q96B70 501 aa4□□□□□ -1.77
SMC6-202ENST00000381272 MAML3Q96JK9 1138 aa4□□□□□ -1.77
SMC6-202ENST00000381272 C16orf92Q96LL3 132 aa4□□□□□ -1.77
SMC6-202ENST00000381272 CCDC17Q96LX7 622 aa4□□□□□ -1.77
SMC6-202ENST00000381272 MBOAT7Q96N66 472 aa4□□□□□ -1.77
SMC6-202ENST00000381272 SPAG5Q96R06 1193 aa4□□□□□ -1.77
SMC6-202ENST00000381272 RUFY1Q96T51 708 aa4□□□□□ -1.77
SMC6-202ENST00000381272 ORAI3Q9BRQ5 295 aa4□□□□□ -1.77
SMC6-202ENST00000381272 AP1M1Q9BXS5 423 aa4□□□□□ -1.77
SMC6-202ENST00000381272 CAPS2Q9BXY5 557 aa4□□□□□ -1.77
SMC6-202ENST00000381272 BHMT2Q9H2M3 363 aa4□□□□□ -1.77
SMC6-202ENST00000381272 SIX2Q9NPC8 291 aa4□□□□□ -1.77
SMC6-202ENST00000381272 GDF3Q9NR23 364 aa4□□□□□ -1.77
SMC6-202ENST00000381272 NYAP2Q9P242 653 aa4□□□□□ -1.77
SMC6-202ENST00000381272 ARMCX3Q9UH62 379 aaPredicted RBP4□□□□□ -1.77
SMC6-202ENST00000381272 MRPL42Q9Y6G3 142 aaKnown RBP4□□□□□ -1.77
SMC6-202ENST00000381272 MYO3BQ8WXR4 1341 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 NRXN2Q9P2S2 1712 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 A0A1W2PRG0 241 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TLDC2A0PJX2 215 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 ZNF233A6NK53 670 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 VGLL3A8MV65 326 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 GAS7O60861 476 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 SHOX2O60902 331 aaPredicted RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 TBCAO75347 108 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 GFPT2O94808 682 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 NDUFB10O96000 172 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 GH2P01242 217 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 NR3C1P04150 777 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 EPB41P11171 864 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 NPR1P16066 1061 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TNFRSF1AP19438 455 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TNFRSF8P28908 595 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 RPS19P39019 145 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 SESN2P58004 480 aaPredicted RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 ICA1Q05084 483 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 PDCLQ13371 301 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 PLS1Q14651 629 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 RRP1BQ14684 758 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 COG2Q14746 738 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 R3HDM1Q15032 1099 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 C21orf62-AS1Q17RA5 79 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 EXOC3L4Q17RC7 722 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 ABCB5Q2M3G0 1257 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 EDRF1Q3B7T1 1238 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TKFCQ3LXA3 575 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 CFAP58Q5T655 872 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 SYDE2Q5VT97 1194 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 RINT1Q6NUQ1 792 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 GBP6Q6ZN66 633 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 LRRTM3Q86VH5 581 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TPH2Q8IWU9 490 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 MYCT1Q8N699 235 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 USP38Q8NB14 1042 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 OR14K1Q8NGZ2 314 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 U2AF1L4Q8WU68 220 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 CRYGNQ8WXF5 182 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 RUBCNQ92622 972 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 DYDC2Q96IM9 177 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 INPP4AQ96PE3 977 aaPredicted RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 OR14A2Q96R54 314 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TUBGCP5Q96RT8 1024 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 ELF4Q99607 663 aaPredicted RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 SH3GL2Q99962 352 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 EIF2AK1Q9BQI3 630 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 GLT8D2Q9H1C3 349 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TDRD3Q9H7E2 651 aaKnown RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 SAE1Q9UBE0 346 aaPredicted RBP3.99□□□□□ -1.77
SMC6-202ENST00000381272 PI4KBQ9UBF8 816 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 RNF14Q9UBS8 474 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TRAF3IP3Q9Y228 551 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 TESMINQ9Y4I5 508 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 SPO11Q9Y5K1 396 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 SLX4Q8IY92 1834 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 SCN9AQ15858 1988 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 ASTN1O14525 1302 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 AFF2P51816 1311 aa3.99□□□□□ -1.77
SMC6-202ENST00000381272 MYH11P35749 1972 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms