RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 ZNF699Q32M78 642 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 FBXO47Q5MNV8 452 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 CES4AQ5XG92 561 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 RSPH3Q86UC2 560 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 AGGF1Q8N302 714 aaeCLIP12.03□□□□□ -0.48
PITRM1-202ENST00000380989 CXorf38Q8TB03 319 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 PYDC1Q8WXC3 89 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 NMD3Q96D46 503 aaKnown RBP12.03□□□□□ -0.48
PITRM1-202ENST00000380989 SMYD3Q9H7B4 428 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.03□□□□□ -0.48
PITRM1-202ENST00000380989 RHBDL2Q9NX52 303 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 WHRNQ9P202 907 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 PGM3O95394 542 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 F7P08709 466 aaPredicted RBP12.03□□□□□ -0.48
PITRM1-202ENST00000380989 CD1EP15812 388 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 PTPN4P29074 926 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 CUL2Q13617 745 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 KCNT1Q5JUK3 1230 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 LPCAT4Q643R3 524 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 SHC3Q92529 594 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 CCDC124Q96CT7 223 aaKnown RBP12.03□□□□□ -0.48
PITRM1-202ENST00000380989 SCLYQ96I15 445 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 WDR83Q9BRX9 315 aaKnown RBP12.03□□□□□ -0.48
PITRM1-202ENST00000380989 SDCBP2Q9H190 292 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 MIOSQ9NXC5 875 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 SCOCQ9UIL1 159 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 STARD13Q9Y3M8 1113 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 PCDHB4Q9Y5E5 795 aa12.03□□□□□ -0.48
PITRM1-202ENST00000380989 AVILO75366 819 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 PSMG1O95456 288 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 ASS1P00966 412 aaKnown RBP12.02□□□□□ -0.48
PITRM1-202ENST00000380989 VHLP40337 213 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 RASSF2P50749 326 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 GPX6P59796 221 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 PARP6Q2NL67 630 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 ZCCHC23Q6ZST2 131 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 RAPH1Q70E73 1250 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 FAM71AQ8IYT1 594 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.48
PITRM1-202ENST00000380989 SNX27Q96L92 541 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 FAM111AQ96PZ2 611 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 LPIN3Q9BQK8 851 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 TMEM165Q9HC07 324 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 DPP3Q9NY33 737 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.02□□□□□ -0.48
PITRM1-202ENST00000380989 TET1Q8NFU7 2136 aa12.02□□□□□ -0.48
PITRM1-202ENST00000380989 ARVCFO00192 962 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 ACADSP16219 412 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.49
PITRM1-202ENST00000380989 GRIA2P42262 883 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 PDK4Q16654 411 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 DPH6Q7L8W6 267 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 POU5F2Q8N7G0 328 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 GAD1Q99259 594 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 PAAF1Q9BRP4 392 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 TMEM120AQ9BXJ8 343 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 EBF3Q9H4W6 596 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 DCLRE1BQ9H816 532 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 HEMK1Q9Y5R4 338 aaPredicted RBP12.02□□□□□ -0.49
PITRM1-202ENST00000380989 SMIM28A0A1B0GU29 152 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 E2F8A0AVK6 867 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 GAS8O95995 478 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 MYL2P10916 166 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
PITRM1-202ENST00000380989 ATXN3P54252 364 aaPredicted RBP12.02□□□□□ -0.49
PITRM1-202ENST00000380989 CCL23P55773 120 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 FNBP1LQ5T0N5 605 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 CDHR3Q6ZTQ4 885 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 CCDC33Q8N5R6 958 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 ENDOVQ8N8Q3 282 aaKnown RBP12.02□□□□□ -0.49
PITRM1-202ENST00000380989 ADAM2Q99965 735 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 PREBQ9HCU5 417 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 CLIC5Q9NZA1 410 aa12.02□□□□□ -0.49
PITRM1-202ENST00000380989 PMM2O15305 246 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 ASPAP45381 313 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 PRMT2P55345 433 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 PTK7Q13308 1070 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 PTK6Q13882 451 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 CNPY1Q3B7I2 92 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 DCAF4L1Q3SXM0 396 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 PAN2Q504Q3 1202 aaKnown RBP12.01□□□□□ -0.49
PITRM1-202ENST00000380989 PPP1R21Q6ZMI0 780 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 TWNKQ96RR1 684 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 THTPAQ9BU02 230 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 KCNK13Q9HB14 408 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 ACSS2Q9NR19 701 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 FAM105AQ9NUU6 356 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 INPP5FQ9Y2H2 1132 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 TYROBPO43914 113 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 HSPA8P11142 646 aaKnown RBP12.01□□□□□ -0.49
PITRM1-202ENST00000380989 CDC42EP1Q00587 391 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 DEUP1Q05D60 604 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 PPP2R5EQ16537 467 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 TCTN1Q2MV58 587 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 EML3Q32P44 896 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 PPP6R3Q5H9R7 873 aaPredicted RBP12.01□□□□□ -0.49
PITRM1-202ENST00000380989 ARHGEF4Q9NR80 690 aa12.01□□□□□ -0.49
PITRM1-202ENST00000380989 CISHQ9NSE2 258 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms