RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 RBL1P28749 1068 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 MPP5Q8N3R9 675 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 SH3TC2Q8TF17 1288 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 TMEM176AQ96HP8 235 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 USP29Q9HBJ7 922 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 PCMTD2Q9NV79 361 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 DPP3Q9NY33 737 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 SNTG2Q9NY99 539 aa16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 ZC3H7BQ9UGR2 993 aaKnown RBP16.86■□□□□ 0.29
NKX3-1-201ENST00000380871 NDC80O14777 642 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 GAS2O43903 313 aaKnown RBP16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 TGDSO95455 350 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 PDGFRBP09619 1106 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 ALDH18A1P54886 795 aaKnown RBP16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 CAND1Q86VP6 1230 aaKnown RBP16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 SLC26A11Q86WA9 606 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 CCDC110Q8TBZ0 833 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 EBF4Q9BQW3 602 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 CDHR5Q9HBB8 845 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 POPDC2Q9HBU9 364 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 RPL26L1Q9UNX3 145 aaKnown RBP16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 PROZP22891 400 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 AKAP5P24588 427 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 UBAP2LQ14157 1087 aaKnown RBP16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 MROH9Q5TGP6 573 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 ILDR2Q71H61 639 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 CATSPER4Q7RTX7 472 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 UNC5BQ8IZJ1 945 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 OR6J1Q8NGC5 347 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 FNIP1Q8TF40 1166 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 OSMRQ99650 979 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 MED7O43513 233 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 RFPL1O75677 317 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 USP1O94782 785 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 HMGCRP04035 888 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 AQP5P55064 265 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 CCNA1P78396 465 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 IRX1P78414 480 aaPredicted RBP16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 GPR162Q16538 588 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 DDX50Q9BQ39 737 aaKnown RBP16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 MAGEB5Q9BZ81 275 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 LHX5Q9H2C1 402 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 PLLPQ9Y342 182 aa16.85■□□□□ 0.29
NKX3-1-201ENST00000380871 CAPN14A8MX76 684 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 SMIM24O75264 130 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 GRIA1P42261 906 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 KRT72Q14CN4 511 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 GRIK4Q16099 956 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 TTC39BQ5VTQ0 682 aaPredicted RBP16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 FOXB2Q5VYV0 432 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 MTHFD1LQ6UB35 978 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 EXOC8Q8IYI6 725 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 C18orf25Q96B23 403 aaPredicted RBP16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 HMX2A2RU54 273 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 CA9Q16790 459 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 OR6B3Q8NGW1 331 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 RXFP2Q8WXD0 754 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 RSAD1Q9HA92 442 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 LRCH1Q9Y2L9 728 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 MAD1L1Q9Y6D9 718 aa16.84■□□□□ 0.29
NKX3-1-201ENST00000380871 IL18RAPO95256 599 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 PDGFRAP16234 1089 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 SMPD1P17405 629 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 CYP3A5P20815 502 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 CMPK2Q5EBM0 449 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 ZNF484Q5JVG2 852 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 SCUBE3Q8IX30 993 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 PLD5Q8N7P1 536 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 TEKT4Q8WW24 435 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 E2F7Q96AV8 911 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 PANX3Q96QZ0 392 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 THTPAQ9BU02 230 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 FRMD8P1Q9BZ68 369 aaPredicted RBP16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 PIH1D1Q9NWS0 290 aaKnown RBP16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 STX18Q9P2W9 335 aaKnown RBP16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 TSPAN16Q9UKR8 245 aa16.83■□□□□ 0.29
NKX3-1-201ENST00000380871 PRR5-ARHGAP8B1AHC4 643 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 I3L4J1 428 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 SNAI1O95863 264 aaPredicted RBP16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 UBTFL6P0CB48 400 aaPredicted RBP16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 IL4RP24394 825 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 SLC26A2P50443 739 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 ARHGAP8P85298 464 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 TEX44Q53QW1 395 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 OR52E8Q6IFG1 317 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 EIF2AQ9BY44 585 aaKnown RBP16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 B3GNT5Q9BYG0 378 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 PAPPA2Q9BXP8 1791 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 SNRPAP09012 282 aaKnown RBP16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 GNAT1P11488 350 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 GMPRP36959 345 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 GPD2P43304 727 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 OCRLQ01968 901 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 PPP6R3Q5H9R7 873 aaPredicted RBP16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 UNC5AQ6ZN44 842 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 RIPOR1Q6ZS17 1223 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 NETO2Q8NC67 525 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 KCNN1Q92952 543 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms