RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PPEF2O14830 753 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 LIASO43766 372 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 B4GALT3O60512 393 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 KIAA0754O94854 1291 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 ODC1P11926 461 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 CCNB1P14635 433 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 RPL34P49207 117 aaKnown RBP8.06□□□□□ -1.12
CDKL5-202ENST00000379996 NCALDP61601 193 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 DEFB103AP81534 67 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 BNIP1Q12981 228 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 SPOPLQ6IQ16 392 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 TRIM72Q6ZMU5 477 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 CCDC105Q8IYK2 499 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 WDTC1Q8N5D0 677 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 EXD1Q8NHP7 514 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 TRIM11Q96F44 468 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 PRO3102Q9H379 93 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 CISHQ9NSE2 258 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 HSFX1Q9UBD0 423 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 MTUS1Q9ULD2 1270 aa8.06□□□□□ -1.12
CDKL5-202ENST00000379996 PLXNA4Q9HCM2 1894 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 SPOPO43791 374 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 TBC1D4O60343 1298 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 LSM8O95777 96 aaKnown RBP8.05□□□□□ -1.12
CDKL5-202ENST00000379996 GALTP07902 379 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 RALAP11233 206 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 MMP8P22894 467 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 WDR72Q3MJ13 1102 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 ZNF280BQ86YH2 543 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 HERC6Q8IVU3 1022 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 SLC39A11Q8N1S5 342 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 CCDC197Q8NCU1 140 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 CEP295NLQ96MC4 621 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 SLITRK1Q96PX8 696 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 RAD9AQ99638 391 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 LBHD1Q9BQE6 289 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-202ENST00000379996 LHX5Q9H2C1 402 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDKL5-202ENST00000379996 PLXNA3P51805 1871 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 TMEM191CA6NGB0 347 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 POMCP01189 267 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 PPM1AP35813 382 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 RAD23BP54727 409 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 PPARDQ03181 441 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 IFFO1Q0D2I5 559 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 CCDC15Q0P6D6 951 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 SMARCB1Q12824 385 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 ZNF268Q14587 947 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-202ENST00000379996 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 ARFGAP1Q8N6T3 406 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 APPL2Q8NEU8 664 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 ATL2Q8NHH9 583 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 ACBD6Q9BR61 282 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 PHACTR1Q9C0D0 580 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 ZNF518BQ9C0D4 1074 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 ATG2AQ2TAZ0 1938 aa8.05□□□□□ -1.12
CDKL5-202ENST00000379996 TMEM120BA0PK00 339 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 TBKBP1A7MCY6 615 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 NRP1O14786 923 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 PRPF4O43172 522 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ALDH2P05091 517 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 KRT19P08727 400 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 FOXN2P32314 431 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SLC11A1P49279 550 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 CREMQ03060 361 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 CCDC38Q502W7 563 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 LRRC38Q5VT99 294 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 CCDC121Q6ZUS5 278 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 TRPM8Q7Z2W7 1104 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ALLCQ8N6M5 410 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 COLGALT1Q8NBJ5 622 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SLC4A11Q8NBS3 891 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 IPO4Q8TEX9 1081 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 TMEM176AQ96HP8 235 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 INTS9Q9NV88 658 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 CDH9Q9ULB4 789 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ZMYND8Q9ULU4 1186 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 BACE2Q9Y5Z0 518 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SF3B1O75533 1304 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 A0A1W2PPC1 479 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 PAPLNO95428 1278 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ASMTLO95671 621 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 VDRP11473 427 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 FSHRP23945 695 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SLCO1A2P46721 670 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 BCAR1P56945 870 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 UBE3AQ05086 875 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 TIGD5Q53EQ6 642 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 C2CD6Q53TS8 623 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 RNASEH2BQ5TBB1 312 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 FAM171BQ6P995 826 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 DDX53Q86TM3 631 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 RBBP8NLQ8NC74 664 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms