RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SERPINB8P50452 374 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 FBXO38Q6PIJ6 1188 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 POMZP3Q6PJE2 187 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 KIRREL3Q8IZU9 778 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 TMEM120AQ9BXJ8 343 aa13.63□□□□□ -0.23
HIPK3-202ENST00000379016 NEDD4P46934 1319 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 WDR19Q8NEZ3 1342 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 MOXD2PA6NHM9 499 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 HSPA13P48723 471 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 PDK1Q15118 436 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 GPAT3Q53EU6 434 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF227Q86WZ6 799 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 SGCDQ92629 289 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 KRT35Q92764 455 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 SH3GLB2Q9NR46 395 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 CD2BP2O95400 341 aaKnown RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 GGPS1O95749 300 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 PURAQ00577 322 aaKnown RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ABRQ12979 859 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 DCTN2Q13561 401 aaKnown RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 MIB1Q86YT6 1006 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF248Q8NDW4 579 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ATP6V1C2Q8NEY4 427 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 TBATAQ96M53 351 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ACTR8Q9H981 624 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ZMYM5Q9UJ78 669 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 MT-CO1P00395 513 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 RBP5P82980 135 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 XRCC4Q13426 336 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 SPIDRQ14159 915 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 SQLEQ14534 574 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 PPP1R13LQ8WUF5 828 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 S100ZQ8WXG8 99 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 PROX1Q92786 737 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 METTL5Q9NRN9 209 aaKnown RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 SMG5Q9UPR3 1016 aaKnown RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 PCDHGB3Q9Y5G1 929 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ABHD14A-ACY1A0A1B0GW23 586 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 CCDC182A6NF36 153 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 CYP2F1P24903 491 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 CBWD3Q5JTY5 395 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 CBWD5Q5RIA9 395 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF655Q8N720 491 aaPredicted RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 RASGEF1AQ8N9B8 481 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 KPNA4O00629 521 aaPredicted RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 MZT2AQ6P582 158 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 OR2L3Q8NG85 312 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 RNPC3Q96LT9 517 aaKnown RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 TBC1D22BQ9NU19 505 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 VPS9D1Q9Y2B5 631 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 PCF11O94913 1555 aaKnown RBP13.62□□□□□ -0.23
HIPK3-202ENST00000379016 FAXCQ5TGI0 409 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 DENND5BQ6ZUT9 1274 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 FATE1Q969F0 183 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF285Q96NJ3 590 aa13.62□□□□□ -0.23
HIPK3-202ENST00000379016 NPHP3-ACAD11A0A0J9YXS1 232 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF189O75820 626 aaPredicted RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 OR5F1O95221 314 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 EIF4BP23588 611 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 CRKP46108 304 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 CASP9P55211 416 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 TMEM179Q6ZVK1 233 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF605Q86T29 641 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 MRPS31Q92665 395 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 DGCR6LQ9BY27 220 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 POLR3AO14802 1390 aaPredicted RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 SNRPAP09012 282 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 EPHB2P29323 1055 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 MRNIPQ6NTE8 343 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ADGRG2Q8IZP9 1017 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 DSEQ9UL01 958 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 TP73O15350 636 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 S100A2P29034 98 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 PRCPP42785 496 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ATXN1P54253 815 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 DCP1BQ8IZD4 617 aaKnown RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 FAM71DQ8N9W8 422 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 HASPINQ8TF76 798 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 THRSPQ92748 146 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 PDE8BO95263 885 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 PRH1P02810 166 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 MC1RQ01726 317 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 TAF1CQ15572 869 aaPredicted RBP13.61□□□□□ -0.23
HIPK3-202ENST00000379016 RAP1GAP2Q684P5 730 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF621Q6ZSS3 439 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 ART5Q96L15 291 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 VPS45Q9NRW7 570 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 MAT2BQ9NZL9 334 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 PIM2Q9P1W9 311 aa13.61□□□□□ -0.23
HIPK3-202ENST00000379016 VPS28Q9UK41 221 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms