RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 RUFY1Q96T51 708 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 LTBP2Q14767 1821 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 GOT1P17174 413 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 CAV1Q03135 178 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 ZNF280DQ6N043 979 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 LRIG3Q6UXM1 1119 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 RSPO2Q6UXX9 243 aaPredicted RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 TAS1R1Q7RTX1 841 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 SCN4BQ8IWT1 228 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 ANKLE1Q8NAG6 615 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 BBOF1Q8ND07 529 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 PWWP2AQ96N64 755 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 PGLYRP2Q96PD5 576 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 SLC9A7Q96T83 725 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 PABPC3Q9H361 631 aaKnown RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 SEMA4AQ9H3S1 761 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 C11orf49Q9H6J7 331 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 KIAA0100Q14667 2235 aaKnown RBP18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 MYO16Q9Y6X6 1858 aa18.03■□□□□ 0.48
THUMPD2-201ENST00000378727 OR6C75A6NL08 312 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 DNALI1O14645 258 aaPredicted RBP18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 OPA1O60313 960 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 TBC1D4O60343 1298 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 DGKIO75912 1065 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 GPR15P49685 360 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 PGFP49763 221 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 GYS2P54840 703 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 IFRD2Q12894 506 aaPredicted RBP18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 SDHAF4Q5VUM1 108 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 TTC9BQ8N6N2 239 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 FAM71DQ8N9W8 422 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 STKLD1Q8NE28 680 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 ARL8AQ96BM9 186 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 DDIT4Q9NX09 232 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 RRN3Q9NYV6 651 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 HEY1Q9Y5J3 304 aa18.02■□□□□ 0.48
THUMPD2-201ENST00000378727 RARGP13631 454 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 AMPD1P23109 780 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 ADRA1BP35368 520 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 NRLP54845 237 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 ELAVL2Q12926 359 aaKnown RBP18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 SLMAPQ14BN4 828 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 CCDC25Q86WR0 208 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 ATAD1Q8NBU5 361 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 RSAD2Q8WXG1 361 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 CWH43Q9H720 699 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 ETNK2Q9NVF9 386 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 VPS18Q9P253 973 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 PCDH10Q9P2E7 1040 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 FBXW11Q9UKB1 542 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 PCDHB5Q9Y5E4 795 aa18.02■□□□□ 0.47
THUMPD2-201ENST00000378727 MAP3K6O95382 1288 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 EFEMP2O95967 443 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 RPL22P35268 128 aaKnown RBP18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 ROR1Q01973 937 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 GBE1Q04446 702 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 ZNF844Q08AG5 666 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 SLC10A2Q12908 348 aaPredicted RBP18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 DDR2Q16832 855 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 TTMPQ5BVD1 217 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 DARS2Q6PI48 645 aaKnown RBP18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 VSTM1Q6UX27 236 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 BEND5Q7L4P6 421 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 TAC4Q86UU9 113 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 NTAN1Q96AB6 310 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 C8orf48Q96LL4 319 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 FAM204AQ9H8W3 233 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 USP29Q9HBJ7 922 aa18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 RCOR3Q9P2K3 495 aaPredicted RBP18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 TPX2Q9ULW0 747 aaKnown RBP18.01■□□□□ 0.47
THUMPD2-201ENST00000378727 VNN2O95498 520 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 RFC2P35250 354 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 YWHAGP61981 247 aaKnown RBP eCLIP18■□□□□ 0.47
THUMPD2-201ENST00000378727 SCAPQ12770 1279 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 CEP85LQ5SZL2 805 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 RNASEH2BQ5TBB1 312 aaKnown RBP18■□□□□ 0.47
THUMPD2-201ENST00000378727 NCBP2-AS2Q69YL0 99 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 SCD5Q86SK9 330 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 DQX1Q8TE96 717 aaKnown RBP18■□□□□ 0.47
THUMPD2-201ENST00000378727 RNF139Q8WU17 664 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 LRRC4CQ9HCJ2 640 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 ARHGEF4Q9NR80 690 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 DNAJC17Q9NVM6 304 aaKnown RBP18■□□□□ 0.47
THUMPD2-201ENST00000378727 PLXNA3P51805 1871 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 TRIM43BA6NCK2 446 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 FAM72CH0Y354 149 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 H7C0C1 242 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 F9P00740 461 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 ARL4AP40617 200 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 MAGEA11P43364 429 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 ATP5OP48047 213 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 CXCR3P49682 368 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 AIF1P55008 147 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 ARPP19P56211 112 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 EFHC2Q5JST6 749 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 FAM72AQ5TYM5 149 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 FAM72DQ6L9T8 149 aa18■□□□□ 0.47
THUMPD2-201ENST00000378727 TMCO2Q7Z6W1 182 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms