RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 KCTD10Q9H3F6 313 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 NMRK1Q9NWW6 199 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 LTN1O94822 1766 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 PREPLQ4J6C6 727 aaPredicted RBP20.26■□□□□ 0.83
PCDH8-202ENST00000377942 LRRC38Q5VT99 294 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 PKN3Q6P5Z2 889 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 SHC3Q92529 594 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 WNT8BQ93098 351 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 PGLYRP2Q96PD5 576 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 SF3B1O75533 1304 aaKnown RBP eCLIP20.26■□□□□ 0.83
PCDH8-202ENST00000377942 DNALI1O14645 258 aaPredicted RBP20.26■□□□□ 0.83
PCDH8-202ENST00000377942 GLP2RO95838 553 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 NOMO2Q5JPE7 1267 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 MFSD7Q6UXD7 560 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 KDM7AQ6ZMT4 941 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 TMEM199Q8N511 208 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 SEC16BQ96JE7 1060 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 CIPCQ9C0C6 399 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 KIF17Q9P2E2 1029 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 DMGDHQ9UI17 866 aaKnown RBP20.26■□□□□ 0.83
PCDH8-202ENST00000377942 VANGL2Q9ULK5 521 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 DERAQ9Y315 318 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 NPY2RP49146 381 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 MPP3Q13368 585 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 PPM1LQ5SGD2 360 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 WSCD1Q658N2 575 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 CAVIN3Q969G5 261 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 ATXN3LQ9H3M9 355 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 IARS2Q9NSE4 1012 aaKnown RBP20.26■□□□□ 0.83
PCDH8-202ENST00000377942 APOC4-APOC2K7ER74 178 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 APOC2P02655 101 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 CCDC130P13994 396 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 OR1E1P30953 314 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 ATP13A1Q9HD20 1204 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 CLCA2Q9UQC9 943 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 BTBD19C9JJ37 291 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 FAM107AO95990 144 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 PYGMP11217 842 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 NPR3P17342 541 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 PTPN7P35236 360 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 CCDC149Q6ZUS6 474 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 PAFAH2Q99487 392 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 GPR20Q99678 358 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 C5orf58C9J3I9 102 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 PPP1R11O60927 126 aaPredicted RBP20.25■□□□□ 0.83
PCDH8-202ENST00000377942 VCLP18206 1134 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 PSEN1P49768 467 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 SCNN1BP51168 640 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 ZNF467Q7Z7K2 595 aaPredicted RBP20.25■□□□□ 0.83
PCDH8-202ENST00000377942 MYO1HQ8N1T3 1032 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 PPP1R36Q96LQ0 422 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 FAM111AQ96PZ2 611 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 ACOT9Q9Y305 439 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 PCDHGC5Q9Y5F6 944 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 SYCE1LA8MT33 242 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 MIIPQ5JXC2 388 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 SNX5Q9Y5X3 404 aa20.25■□□□□ 0.83
PCDH8-202ENST00000377942 YBX3P16989 372 aaKnown RBP eCLIP20.24■□□□□ 0.83
PCDH8-202ENST00000377942 ICAM3P32942 547 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 IRAK1P51617 712 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 WASHC5Q12768 1159 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 RRP1BQ14684 758 aaKnown RBP20.24■□□□□ 0.83
PCDH8-202ENST00000377942 KRT72Q14CN4 511 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 TRPM8Q7Z2W7 1104 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 OOSP2Q86WS3 158 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 GANQ9H2C0 597 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 FRMD3A2A2Y4 597 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 ANKRD65E5RJM6 399 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 AMPD1P23109 780 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 FLT3LGP49771 235 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 DGKZQ13574 1117 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 UGCGQ16739 394 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 KBTBD12Q3ZCT8 623 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 ERP27Q96DN0 273 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 MFSD14AQ96MC6 490 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 RNF112Q9ULX5 631 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 ST3GAL5Q9UNP4 418 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 STRA8Q7Z7C7 330 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.24■□□□□ 0.83
PCDH8-202ENST00000377942 L1RE1Q9UN81 338 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 E2F8A0AVK6 867 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 SYNCRIPO60506 623 aaKnown RBP20.24■□□□□ 0.83
PCDH8-202ENST00000377942 PPP3CCP48454 512 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 KCNK10P57789 538 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 MRPL17Q9NRX2 175 aaKnown RBP20.24■□□□□ 0.83
PCDH8-202ENST00000377942 PTCH2Q9Y6C5 1203 aa20.24■□□□□ 0.83
PCDH8-202ENST00000377942 FAM9CQ8IZT9 166 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 TMA16Q96EY4 203 aaKnown RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 APOL2Q9BQE5 337 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 TMBIM4Q9HC24 238 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 FGF10O15520 208 aaPredicted RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 ENO3P13929 434 aaPredicted RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 SUGP1Q8IWZ8 645 aaKnown RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 LRRC43Q8N309 656 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 ANKRD52Q8NB46 1076 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 EPS8L3Q8TE67 593 aaKnown RBP20.23■□□□□ 0.83
PCDH8-202ENST00000377942 KAT5Q92993 513 aa20.23■□□□□ 0.83
PCDH8-202ENST00000377942 CELF6Q96J87 481 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms