RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 HRO43593 1189 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 FBXO21O94952 628 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 APBB3O95704 486 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 LTFP02788 710 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 CYBBP04839 570 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 PNMA6AP0CW24 399 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 HARS2P49590 506 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 DGKEP52429 567 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 MRPS21P82921 87 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 STX1AQ16623 288 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 TCP11X2Q5H9J9 407 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 CT47A1Q5JQC4 288 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 CCDC183Q5T5S1 534 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 Q6ZNB5 142 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 ETFBKMTQ8IXQ9 262 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 KIAA2013Q8IYS2 634 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 ZNF276Q8N554 614 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 TERB1Q8NA31 727 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 TXNDC5Q8NBS9 432 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 ZNF606Q8WXB4 792 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 LSM14BQ9BX40 385 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 ANO10Q9NW15 660 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 AJAP1Q9UKB5 411 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 AGO1Q9UL18 857 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 CNTN6Q9UQ52 1028 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 BECN2A8MW95 431 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 CAPN9O14815 690 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 AXIN1O15169 862 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 CACNG3O60359 315 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 TSPAN3O60637 253 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 RPP40O75818 363 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 KLKB1P03952 638 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 NCAM1P13591 858 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 CNR2P34972 360 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 CHKAP35790 457 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 GPD2P43304 727 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 TNFRSF4P43489 277 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 ACADSBP45954 432 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 DGKGP49619 791 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 PTK2Q05397 1052 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 ANO7Q6IWH7 933 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 C11orf57Q6ZUT1 292 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 SCUBE3Q8IX30 993 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 CAMKK1Q8N5S9 505 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 ZNF513Q8N8E2 541 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 ENOX1Q8TC92 643 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 DDI1Q8WTU0 396 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 IRGQQ8WZA9 623 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 SHC3Q92529 594 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 ERLEC1Q96DZ1 483 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 TPSD1Q9BZJ3 242 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 VPS16Q9H269 839 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 PDCL3Q9H2J4 239 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 SIX2Q9NPC8 291 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 MARK1Q9P0L2 795 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 BCCIPQ9P287 314 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 MMP17Q9ULZ9 603 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 USP18Q9UMW8 372 aa12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 HBS1LQ9Y450 684 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-203ENST00000377808 FAM170AA1A519 330 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 E5RJQ4 531 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 SART1O43290 800 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 GABBR2O75899 941 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 ALDH1A2O94788 518 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 HOXA6P31267 233 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 KRT9P35527 623 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 WASP42768 502 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 PDCLQ13371 301 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 EOGTQ5NDL2 527 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 RBM43Q6ZSC3 357 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 TOGARAM2Q6ZUX3 1019 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 TRMT11Q7Z4G4 463 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 SCML4Q8N228 414 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 PGBD3Q8N328 593 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 PHTF2Q8N3S3 785 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 IL17RCQ8NAC3 791 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 GAB3Q8WWW8 586 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 SYNCQ9H7C4 482 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 CEP83Q9Y592 693 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 FHOD1Q9Y613 1164 aa12.08□□□□□ -0.48
SMARCE1-203ENST00000377808 KIAA1549LQ6ZVL6 1849 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 TCRBV21S2A2A0A5A6 115 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 SGK1O00141 431 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 FOXN3O00409 490 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 GBP1P32455 592 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 TBX4P57082 545 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 DRAP1Q14919 205 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 KRT31Q15323 416 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 TRIP4Q15650 581 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 CRY1Q16526 586 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 FKBP15Q5T1M5 1219 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 EGFLAMQ63HQ2 1017 aa12.07□□□□□ -0.48
SMARCE1-203ENST00000377808 LAIR1Q6GTX8 287 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms