RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 THEMIS2Q5TEJ8 643 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 RNF220Q5VTB9 566 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 PMF1Q6P1K2 205 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 ULK2Q8IYT8 1036 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 STKLD1Q8NE28 680 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 GSDMBQ8TAX9 411 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 COPS5Q92905 334 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 CYP3A43Q9HB55 503 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 SLC7A8Q9UHI5 535 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
ACTN1-202ENST00000376839 EVPLQ92817 2033 aa13.69□□□□□ -0.22
ACTN1-202ENST00000376839 SPECC1L-ADORA2AF8WAN1 911 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 MAP3K7O43318 606 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 LGR5O75473 907 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 TM7SF2O76062 418 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 TGFB3P10600 412 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 ADORA2AP29274 412 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 SLC10A2Q12908 348 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 GOLGA7BQ2TAP0 167 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 C16orf46Q6P387 395 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 OLFML1Q6UWY5 402 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 SLC25A41Q8N5S1 370 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 PPFIBP2Q8ND30 876 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 RILPQ96NA2 401 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 MMP19Q99542 508 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 LYPLA1O75608 230 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 PGK2P07205 417 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 CRHR1P34998 444 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 ATXN1P54253 815 aaKnown RBP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 SLC10A6Q3KNW5 377 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 MCUQ8NE86 351 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 ZNF778Q96MU6 729 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 ZNF184Q99676 751 aaPredicted RBP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 MAF1Q9H063 256 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 ASB3Q9Y575 518 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 SOCS7O14512 581 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 ITM2AO43736 263 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 GSRP00390 522 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 HDAC4P56524 1084 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 INCA1Q0VD86 236 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 STX3Q13277 289 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 SMAD1Q15797 465 aaKnown RBP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 CELF3Q5SZQ8 465 aaKnown RBP13.68□□□□□ -0.22
ACTN1-202ENST00000376839 RIOX2Q8IUF8 465 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 SCUBE3Q8IX30 993 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 DEPDC1BQ8WUY9 529 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 LRRC39Q96DD0 335 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 MTBPQ96DY7 904 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 B3GNT5Q9BYG0 378 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 NRDE2Q9H7Z3 1164 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 VRTNQ9H8Y1 702 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 IFT122Q9HBG6 1241 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
ACTN1-202ENST00000376839 F8W8V4 182 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 SMIM24O75264 130 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 GABBR2O75899 941 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 USP1O94782 785 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 ANPEPP15144 967 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 CYP2F1P24903 491 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 ATICP31939 592 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 IGBP1P78318 339 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 CRADDP78560 199 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-202ENST00000376839 NET1Q7Z628 596 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-202ENST00000376839 TTC30AQ86WT1 665 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
ACTN1-202ENST00000376839 IFT43Q96FT9 208 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 TSC22D3Q99576 134 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 XAB2Q9HCS7 855 aaKnown RBP13.67□□□□□ -0.22
ACTN1-202ENST00000376839 MFHAS1Q9Y4C4 1052 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 TRIP11Q15643 1979 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 SDR42E2A6NKP2 422 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 DPYSL4O14531 572 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 SDC4P31431 198 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 ACTR3P61158 418 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 RPL10AP62906 217 aaKnown RBP13.67□□□□□ -0.22
ACTN1-202ENST00000376839 AMHR2Q16671 573 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 FASTKD1Q53R41 847 aaKnown RBP13.67□□□□□ -0.22
ACTN1-202ENST00000376839 FOXB2Q5VYV0 432 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 PLPPR4Q7Z2D5 763 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 TTC1Q99614 292 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 ZNF670Q9BS34 389 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 APOL6Q9BWW8 343 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 SPATC1LQ9H0A9 340 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 VCXQ9H320 206 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 SPATS2LQ9NUQ6 558 aaKnown RBP13.67□□□□□ -0.22
ACTN1-202ENST00000376839 FAM49BQ9NUQ9 324 aa13.67□□□□□ -0.22
ACTN1-202ENST00000376839 PIH1D1Q9NWS0 290 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms