RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 THADAQ6YHU6 1953 aa15.49■□□□□ 0.07
HDAC6-204ENST00000376643 STC2O76061 302 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 CFIP05156 583 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 SERPINF2P08697 491 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 GNSP15586 552 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 TBXAS1P24557 533 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-204ENST00000376643 PTGER3P43115 390 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 BCAT1P54687 386 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 FKBP3Q00688 224 aaKnown RBP15.48■□□□□ 0.07
HDAC6-204ENST00000376643 LRRC63Q05C16 580 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 ZNF33AQ06730 810 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 ZNF394Q53GI3 561 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 TCERG1LQ5VWI1 586 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 EGFLAMQ63HQ2 1017 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 ARMCX6Q7L4S7 300 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 CPXM2Q8N436 756 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 PLD4Q96BZ4 506 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 SLC2A11Q9BYW1 496 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 NMUR1Q9HB89 426 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 OSER1Q9NX31 292 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 MARCH2Q9P0N8 246 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 MBD1Q9UIS9 605 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-204ENST00000376643 KIAA1257Q9ULG3 409 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 NUP205Q92621 2012 aa15.48■□□□□ 0.07
HDAC6-204ENST00000376643 PLXND1Q9Y4D7 1925 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 A0A1W2PQF6 199 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 UPK3BL1B0FP48 263 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 UPK3BL2E5RIL1 263 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 CDX4O14627 284 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 TIMM44O43615 452 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 SYNCRIPO60506 623 aaKnown RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 PENKP01210 267 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 ENGP17813 658 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 CORO1AP31146 461 aaKnown RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 HARS2P49590 506 aaKnown RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 YWHAGP61981 247 aaKnown RBP eCLIP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 ARID5AQ03989 594 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 CETN1Q12798 172 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 EFEMP1Q12805 493 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 UAP1L1Q3KQV9 507 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 SGO2Q562F6 1265 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 DCAF17Q5H9S7 520 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 WDR45BQ5MNZ6 344 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 ZNF658Q5TYW1 1059 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 ANKS1BQ7Z6G8 1248 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 METTL3Q86U44 580 aaKnown RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 PIGZQ86VD9 579 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 ZNF557Q8N988 423 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 RNF139Q8WU17 664 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 LRRC4Q9HBW1 653 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 METTL14Q9HCE5 456 aaKnown RBP15.47■□□□□ 0.07
HDAC6-204ENST00000376643 FBXO10Q9UK96 956 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 NFE2L3Q9Y4A8 694 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 ABCA7Q8IZY2 2146 aa15.47■□□□□ 0.07
HDAC6-204ENST00000376643 IGHV1OR15-9A0A0B4J2B8 117 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 TMEM8BA6NDV4 472 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 PATE3B3GLJ2 98 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 XPO1O14980 1071 aaKnown RBP15.46■□□□□ 0.07
HDAC6-204ENST00000376643 OPHN1O60890 802 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 LATS1O95835 1130 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 ZBED1O96006 694 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 NDUFV2P19404 249 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 OXTRP30559 389 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 MAPK8P45983 427 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 PGFP49763 221 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 RAD23BP54727 409 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 BST2Q10589 180 aaKnown RBP15.46■□□□□ 0.07
HDAC6-204ENST00000376643 RAB41Q5JT25 222 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 SCD5Q86SK9 330 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 SIX6OS1Q8N1H7 587 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 SLC4A11Q8NBS3 891 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 WBP2Q969T9 261 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 IRX2Q9BZI1 471 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-204ENST00000376643 ZDHHC5Q9C0B5 715 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 ZDHHC4Q9NPG8 344 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 ARMCX3Q9UH62 379 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-204ENST00000376643 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 COQ4Q9Y3A0 265 aa15.46■□□□□ 0.07
HDAC6-204ENST00000376643 HBS1LQ9Y450 684 aaKnown RBP15.46■□□□□ 0.07
HDAC6-204ENST00000376643 MYOFQ9NZM1 2061 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 PRRT4C9JH25 899 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 PSMA7O14818 248 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 MDM4O15151 490 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 CISD3P0C7P0 127 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 SETSIPP0DME0 302 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 ITPKAP23677 461 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 WASP42768 502 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 TKTL1P51854 596 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 MFAP3P55082 362 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 CUL2Q13617 745 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 BECN1Q14457 450 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 STILQ15468 1287 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 PM20D1Q6GTS8 502 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 KIAA1324Q6UXG2 1013 aaKnown RBP15.45■□□□□ 0.06
HDAC6-204ENST00000376643 GOLGA1Q92805 767 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 SMARCE1Q969G3 411 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 MRGPRX1Q96LB2 322 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 CACNA2D2Q9NY47 1150 aa15.45■□□□□ 0.06
HDAC6-204ENST00000376643 THAP10Q9P2Z0 257 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms