RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SNX30Q5VWJ9 437 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 SCYL2Q6P3W7 929 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 SND1Q7KZF4 910 aaKnown RBP eCLIP11.55□□□□□ -0.56
PDPN-202ENST00000376057 PCGF5Q86SE9 256 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 COLGALT1Q8NBJ5 622 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 PCDH19Q8TAB3 1148 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ACTL9Q8TC94 416 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ATG4AQ8WYN0 398 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 HAPLN3Q96S86 360 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 KCTD15Q96SI1 283 aaPredicted RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 VN1R3Q9BXE9 311 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 PIGVQ9NUD9 493 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 FNIP2Q9P278 1114 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ALPK3Q96L96 1907 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 CENPFP49454 3210 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ESYT3A0FGR9 886 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 HACD1B0YJ81 288 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 H3BRJ5 948 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 TP73O15350 636 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ZDHHC11BP0C7U3 371 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 NCAM1P13591 858 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 KCNJ1P48048 391 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 MRPS25P82663 173 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 OTUD4Q01804 1114 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 GPS2Q13227 327 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 PPP2R5DQ14738 602 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 TRADDQ15628 312 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ZC3H12AQ5D1E8 599 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 KAZNQ674X7 775 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 LRIG3Q6UXM1 1119 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 SCD5Q86SK9 330 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 IQCKQ8N0W5 287 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 CCDC185Q8N715 623 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 PHOSPHO2Q8TCD6 241 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 CSPG4P5Q96PW8 444 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 FMO2Q99518 471 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 CALN1Q9BXU9 219 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 AAASQ9NRG9 546 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 OLA1Q9NTK5 396 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 SPG21Q9NZD8 308 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 MTRF1LQ9UGC7 380 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 C1RP00736 705 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 TUFMP49411 452 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 DPYSQ14117 519 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 SLMAPQ14BN4 828 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 PAFAH1B3Q15102 231 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 CA9Q16790 459 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 EFHC2Q5JST6 749 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ZNF365Q70YC5 407 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 TMEM173Q86WV6 379 aaPredicted RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 NDRG1Q92597 394 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 P3H4Q92791 437 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 ACSF2Q96CM8 615 aaPredicted RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 CDK5RAP1Q96SZ6 601 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 NEUROG2Q9H2A3 272 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 MED4Q9NPJ6 270 aa11.55□□□□□ -0.56
PDPN-202ENST00000376057 AFF4Q9UHB7 1163 aaKnown RBP11.55□□□□□ -0.56
PDPN-202ENST00000376057 MCF2LO15068 1137 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 KRT14P02533 472 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 FAM153BP0C7A2 387 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 ARL4AP40617 200 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 CALCOCO2Q13137 446 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 SNX1Q13596 522 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 FAM153CQ494X1 144 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 RSPO2Q6UXX9 243 aaPredicted RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 TAS1R1Q7RTX1 841 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 TMC3Q7Z5M5 1100 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 SLC7A14Q8TBB6 771 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDPN-202ENST00000376057 ABI2Q9NYB9 513 aaPredicted RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 CWC15Q9P013 229 aaKnown RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 FAM153AQ9UHL3 310 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 IRAK2O43187 625 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 RRP9O43818 475 aaKnown RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 OR4Q2P0C623 313 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 ATF2P15336 505 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 HOXC13P31276 330 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 DEFB103AP81534 67 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 PSMD5Q16401 504 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 BTBD8Q5XKL5 378 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 HIBCHQ6NVY1 386 aaPredicted RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 RNF19BQ6ZMZ0 732 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 HOOK3Q86VS8 718 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 DDX42Q86XP3 938 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDPN-202ENST00000376057 CEP57Q86XR8 500 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 SCAMP5Q8TAC9 235 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 DQX1Q8TE96 717 aaKnown RBP11.54□□□□□ -0.56
PDPN-202ENST00000376057 HAUS1Q96CS2 278 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 C1orf74Q96LT6 269 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 SH3GL2Q99962 352 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 BRD8Q9H0E9 1235 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 RXFP1Q9HBX9 757 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 ZNF148Q9UQR1 794 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 SNX24Q9Y343 169 aa11.54□□□□□ -0.56
PDPN-202ENST00000376057 SLC2A3P11169 496 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms