RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 DGKDQ16760 1214 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 KCTD19Q17RG1 926 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ALG10BQ5I7T1 473 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 THEMIS2Q5TEJ8 643 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CASP12Q6UXS9 341 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ZBTB33Q86T24 672 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PCSK9Q8NBP7 692 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 VANGL1Q8TAA9 524 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TM9SF3Q9HD45 589 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MCM9Q9NXL9 1143 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MSH6P52701 1360 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 KANTRA0A1W2PQU2 76 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 DCDC2BA2VCK2 349 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 NDUFB5O43674 189 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 DYRK3O43781 588 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 NMT2O60551 498 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CLN5O75503 358 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ASMTLO95671 621 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CHRNB4P30926 498 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MDH1P40925 334 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 NKX6-1P78426 367 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PDE4DQ08499 809 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 FBXO38Q6PIJ6 1188 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ACBD4Q8NC06 268 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TMCO6Q96DC7 493 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 RC3H2Q9HBD1 1191 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 BIN3Q9NQY0 253 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MTMR4Q9NYA4 1195 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 DDX25Q9UHL0 483 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SBNO1A3KN83 1393 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SYNJ2BP-COX16A0A087WUM0 186 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SGTAO43765 313 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SEC24AO95486 1093 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MTHFD1P11586 935 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ENO3P13929 434 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CYP11B1P15538 503 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 IFNGR2P38484 337 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MNDAP41218 407 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CACNB3P54284 484 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CYP4F2P78329 520 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 GSTO1P78417 241 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CYP4F3Q08477 520 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TMEM53Q6P2H8 277 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MIGA2Q7L4E1 593 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MOAP1Q96BY2 351 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SLC41A3Q96GZ6 507 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CITED2Q99967 270 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TDRD1Q9BXT4 1180 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 GABBR1Q9UBS5 961 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SNX14Q9Y5W7 946 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 M0R2C6 588 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 RLN2P04090 185 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PRKCBP05771 671 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PNMA6AP0CW24 399 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 LCP2Q13094 533 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 HIST2H2ACQ16777 129 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PTPRNQ16849 979 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TTC39BQ5VTQ0 682 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ERAP2Q6P179 960 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CHSY1Q86X52 802 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MAPKAPK5Q8IW41 473 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ZNF548Q8NEK5 533 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ING5Q8WYH8 240 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TMEM203Q969S6 136 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ALPK1Q96QP1 1244 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 C7orf50Q9BRJ6 194 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 H2AFJQ9BTM1 129 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 YTHDF1Q9BYJ9 559 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 GANQ9H2C0 597 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PCDH10Q9P2E7 1040 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PCSK1NQ9UHG2 260 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MAP1BP46821 2468 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ABCC9O60706 1549 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SERPING1P05155 500 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CNPP09543 421 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ANPEPP15144 967 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 AMPD1P23109 780 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MAGEA11P43364 429 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 SKP1P63208 163 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 MTX1Q13505 466 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TTLL4Q14679 1199 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 TAF13Q15543 124 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 INSCQ1MX18 579 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CCNYL1Q8N7R7 359 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 FAM46DQ8NEK8 389 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 PHF23Q9BUL5 403 aaPredicted RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 FN3KQ9H479 309 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 LCHNA4D1U4 455 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 RPS6KA5O75582 802 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 REM1O75628 298 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 LDHCP07864 332 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 FAM58BPP0C7Q3 252 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 CPA1P15085 419 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 POU1F1P28069 291 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 BYSLQ13895 437 aaKnown RBP6.11□□□□□ -1.43
SCN2A-202ENST00000375427 ZNF550Q7Z398 422 aa6.11□□□□□ -1.43
SCN2A-202ENST00000375427 C16orf71Q8IYS4 520 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms