RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 TBC1D3BA6NDS4 549 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 GRXCR2A6NFK2 248 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 TCEA1P23193 301 aaKnown RBP15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CYP2F1P24903 491 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 STIP1P31948 543 aaKnown RBP15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 AASDHQ4L235 1098 aaPredicted RBP15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 ATP6AP1LQ52LC2 224 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 PLPP4Q5VZY2 271 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 SCUBE3Q8IX30 993 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CYP2W1Q8TAV3 490 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 MIEF1Q9NQG6 463 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CISHQ9NSE2 258 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 WDR27A2RRH5 827 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CCT8L1PA6NM43 557 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 YWHAQP27348 245 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 SCNN1AP37088 669 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 EDRF1Q3B7T1 1238 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CBWD3Q5JTY5 395 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CBWD5Q5RIA9 395 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 MARK2Q7KZI7 788 aaKnown RBP15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 TMEM199Q8N511 208 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 SLC28A3Q9HAS3 691 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 BLOC1S6Q9UL45 172 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 SOX13Q9UN79 622 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CAPN6Q9Y6Q1 641 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 PDZK1P1A8MUH7 402 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 SERPINB8P50452 374 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 WLSQ5T9L3 541 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 SEMA6BQ9H3T3 888 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 PDGFCQ9NRA1 345 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 CLTCL1P53675 1640 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 ALKQ9UM73 1620 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 GLP2RO95838 553 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 KRT20P35900 424 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 FDFT1P37268 417 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 PLD1Q13393 1074 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 AGBL2Q5U5Z8 902 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 MTDHQ86UE4 582 aaKnown RBP15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 ANKEF1Q9NU02 776 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 FAM50BQ9Y247 325 aa15.12■□□□□ 0.01
NOTCH4-201ENST00000375023 PSMD12O00232 456 aaPredicted RBP15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 TRDMT1O14717 391 aaKnown RBP15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 RRM2P31350 389 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 DGKKQ5KSL6 1271 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 TXNRD3Q86VQ6 643 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 TNIP2Q8NFZ5 429 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 SDR42E2A6NKP2 422 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 SARSP49591 514 aaKnown RBP15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 DAB2IPQ5VWQ8 1189 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 RFX7Q2KHR2 1363 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 ALDH2P05091 517 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 MMRN1Q13201 1228 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 GIT2Q14161 759 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 MTSS1LQ765P7 747 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 ATP8B4Q8TF62 1192 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 PPP1R10Q96QC0 940 aaKnown RBP15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 AAR2Q9Y312 384 aaKnown RBP15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 DYRK3O43781 588 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 MSH3P20585 1137 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 SPOCD1Q6ZMY3 1216 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 RIPOR1Q6ZS17 1223 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 ILDR2Q71H61 639 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 KRT77Q7Z794 578 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 ATG16L2Q8NAA4 619 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 TADA1Q96BN2 335 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 TMEM176AQ96HP8 235 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 POLG2Q9UHN1 485 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 TSC22D4Q9Y3Q8 395 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 SPACA6W5XKT8 324 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 NR6A1Q15406 480 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 AGKQ53H12 422 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 TMEM120AQ9BXJ8 343 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 BCL2L14Q9BZR8 327 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 NDEL1Q9GZM8 345 aa15.11■□□□□ 0.01
NOTCH4-201ENST00000375023 NT5C2P49902 561 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 CYLC2Q14093 348 aaPredicted RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 ADGRA1Q86SQ6 560 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 CLYBLQ8N0X4 340 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 PAFAH2Q99487 392 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 KCNQ5Q9NR82 932 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 TBC1D23Q9NUY8 699 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 RBM22Q9NW64 420 aaKnown RBP eCLIP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 IQSEC2Q5JU85 1478 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 FAM86B1E9PN63 330 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 KRT33AO76009 404 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 OR1E1P30953 314 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 GRK3P35626 688 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 BACE1P56817 501 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 VAC14Q08AM6 782 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 ARSJQ5FYB0 599 aaPredicted RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 PCSK9Q8NBP7 692 aaKnown RBP15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 RELTQ969Z4 430 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 KLHL1Q9NR64 748 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 GPR75-ASB3A0A0A6YYF3 556 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 AMPD2Q01433 879 aa15.1■□□□□ 0.01
NOTCH4-201ENST00000375023 DSG1Q02413 1049 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms