RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 DMAP1Q9NPF5 467 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CWC15Q9P013 229 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PAK5Q9P286 719 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TTC3P53804 2025 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TLDC2A0PJX2 215 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 YJEFN3A6XGL0 299 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 E7ENQ6 273 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 M0QYT0 321 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 DNM1LO00429 736 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 B4GALT3O60512 393 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SLC34A2O95436 690 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 LTFP02788 710 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ARL4AP40617 200 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PITX1P78337 314 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TSPY1Q01534 308 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 DEUP1Q05D60 604 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SCAPQ12770 1279 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 BFSP2Q13515 415 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 STAT4Q14765 748 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 HIF1AQ16665 826 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 LRRC31Q6UY01 552 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CDKL3Q8IVW4 592 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 FAM126BQ8IXS8 530 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 C9orf72Q96LT7 481 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TMLHEQ9NVH6 421 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TMEM161AQ9NX61 479 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 HEY1Q9Y5J3 304 aa18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SF3B1O75533 1304 aaKnown RBP eCLIP18.69■□□□□ 0.58
HLA-DQB1-201ENST00000374943 E7ESA3 106 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 DDHD2O94830 711 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 USP17L7P0C7H9 530 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ARL4CP56559 192 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ANKRD22Q5VYY1 191 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 C4orf22Q6V702 233 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 BEND5Q7L4P6 421 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ZNF280BQ86YH2 543 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CCDC77Q9BR77 488 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PIGVQ9NUD9 493 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TBC1D13Q9NVG8 400 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 LGALS13Q9UHV8 139 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 NAALADL1Q9UQQ1 740 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SCN5AQ14524 2016 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 FNDC1Q4ZHG4 1894 aaPredicted RBP18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TET1Q8NFU7 2136 aa18.68■□□□□ 0.58
HLA-DQB1-201ENST00000374943 A0A087WUV0 522 aaPredicted RBP18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ERICH4A6NGS2 130 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 H3BRJ5 948 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CAPN9O14815 690 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 BDNFP23560 247 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 KCNJ11Q14654 390 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SLC45A4Q5BKX6 768 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 NCBP2-AS2Q69YL0 99 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 LRRTM3Q86VH5 581 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 QKIQ96PU8 341 aaKnown RBP eCLIP18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TRIM62Q9BVG3 475 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 RHOBTB2Q9BYZ6 727 aa18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 WDR6Q9NNW5 1121 aaKnown RBP18.67■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SMIM23A6NLE4 172 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 F8W810 466 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PITPNM1O00562 1244 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CHADO15335 359 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 KCNN4O15554 427 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TMEM63AO94886 807 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 GOT1P17174 413 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 RBL1P28749 1068 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ATP5DP30049 168 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 LSP1P33241 339 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 MAGEA6P43360 314 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 MMP13P45452 471 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 CDR1P51861 262 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 RABGGTBP53611 331 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 GUCY1A3Q02108 690 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 YWHAHQ04917 246 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 LONRF1Q17RB8 773 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PLEKHG4Q58EX7 1191 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 EFHC2Q5JST6 749 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 C4orf50Q6ZRC1 276 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PYROXD2Q8N2H3 581 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 RIBC1Q8N443 379 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 RNF139Q8WU17 664 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 OLFM3Q96PB7 478 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 TMEM209Q96SK2 561 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 MAGEB5Q9BZ81 275 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 MICAL3Q7RTP6 2002 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 HACD1B0YJ81 288 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 NBNO60934 754 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 OAZ2O95190 189 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 F9P00740 461 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SLCO1A2P46721 670 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 IFI35P80217 286 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 MLLT1Q03111 559 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 GBE1Q04446 702 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SLC10A2Q12908 348 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PDIA2Q13087 525 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 GPNMBQ14956 572 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 ZSCAN26Q16670 478 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 BZW1Q7L1Q6 419 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 SLC7A14Q8TBB6 771 aa18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 FRMD8Q9BZ67 464 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-201ENST00000374943 PPCSQ9HAB8 311 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms