RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 LBPP18428 481 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 NFYCQ13952 458 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 FUT11Q495W5 492 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 CIAPIN1Q6FI81 312 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 LPAR1Q92633 364 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 PROX1Q92786 737 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
HSPG2-203ENST00000374695 KIAA0100Q14667 2235 aaKnown RBP8.6□□□□□ -1.03
HSPG2-203ENST00000374695 GDPD5Q8WTR4 605 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 CPA5Q8WXQ8 436 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 WDR12Q9GZL7 423 aaKnown RBP8.6□□□□□ -1.03
HSPG2-203ENST00000374695 EPB42P16452 691 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 DGKDQ16760 1214 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 EXOC3L1Q86VI1 746 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 BTBD10Q9BSF8 475 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 HPS4Q9NQG7 708 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 TBC1D13Q9NVG8 400 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 SIK3Q9Y2K2 1263 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 SPIRE1Q08AE8 756 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 USPL1Q5W0Q7 1092 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 C2orf69Q8N8R5 385 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 ZSWIM1Q9BR11 485 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 KLHL1Q9NR64 748 aa8.6□□□□□ -1.03
HSPG2-203ENST00000374695 LINC00854A0A1B0GVQ3 168 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 IRGMA1A4Y4 181 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CHP2O43745 196 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 EGFRP00533 1210 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 AKR1B1P15121 316 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CYP24A1Q07973 514 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 NANOGNBQ7Z5D8 188 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 FAM228AQ86W67 206 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 UTP15Q8TED0 518 aaKnown RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CAVIN3Q969G5 261 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 MYDGFQ969H8 173 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 LRRC40Q9H9A6 602 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RAB21Q9UL25 225 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RPN2P04844 631 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 MCAMP43121 646 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RASA2Q15283 850 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 LAYNQ6UX15 382 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 KBTBD8Q8NFY9 601 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 UCMAQ8WVF2 138 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CD248Q9HCU0 757 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 L1RE1Q9UN81 338 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 PALLDQ8WX93 1383 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SSNA1O43805 119 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SLC34A1Q06495 639 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SMAD1Q15797 465 aaKnown RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 NEDD8Q15843 81 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 GRPEL2Q8TAA5 225 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 NUAK2Q9H093 628 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 AAASQ9NRG9 546 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RAD18Q9NS91 495 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 BAZ2AQ9UIF9 1905 aaKnown RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 MROH7-TTC4A0A0A0MT08 1334 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RNASEH1O60930 286 aaKnown RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 PRR29P0C7W0 189 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 NR2C2P49116 596 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 MTTPP55157 894 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SLC30A5Q8TAD4 765 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 ACTRT1Q8TDG2 376 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SPIRE2Q8WWL2 714 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 NIF3L1Q9GZT8 377 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 NOL6Q9H6R4 1146 aaKnown RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 POLR1BQ9H9Y6 1135 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 C1orf232A0A0U1RR37 186 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 TEX33O43247 280 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 NDUFB5O43674 189 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SLC11A2P49281 568 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CDK7P50613 346 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 PRKAA1Q13131 559 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 FNIP1Q8TF40 1166 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 HAO1Q9UJM8 370 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 USP17L10C9JJH3 530 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SUPT7LO94864 414 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CPA2P48052 419 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 TMEM132BQ14DG7 1078 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 INO80DQ53TQ3 878 aaPredicted RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 ZNF671Q8TAW3 534 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SMAD5Q99717 465 aaKnown RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 KCTD10Q9H3F6 313 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 IRAK3Q9Y616 596 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 ZCCHC11Q5TAX3 1644 aaKnown RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 PDPK2PQ6A1A2 396 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 DHFR2Q86XF0 187 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 MIER2Q8N344 545 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 OR6J1Q8NGC5 347 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.59□□□□□ -1.035e-7■■■□□ 14.9
HSPG2-203ENST00000374695 CHORDC1Q9UHD1 332 aaPredicted RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RAD51BO15315 384 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RECQL5O94762 991 aaPredicted RBP8.59□□□□□ -1.03
HSPG2-203ENST00000374695 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 SPIDRQ14159 915 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 EPHA7Q15375 998 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 ALG11Q2TAA5 492 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 RUNDC3AQ59EK9 446 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 BNIPLQ7Z465 357 aa8.59□□□□□ -1.03
HSPG2-203ENST00000374695 CD302Q8IX05 232 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms