RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZBTB10Q96DT7 871 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 VTA1Q9NP79 307 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 LRRC4BQ9NT99 713 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 PADI4Q9UM07 663 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 SCAMP3O14828 347 aaKnown RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 MRPS35P82673 323 aaKnown RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 NFYCQ13952 458 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 OASLQ15646 514 aaKnown RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 PPIL6Q8IXY8 311 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 DPP10Q8N608 796 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 SOCS4Q8WXH5 440 aa14.73□□□□□ -0.05
TRAF1-201ENST00000373887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.73□□□□□ -0.05
TRAF1-201ENST00000373887 DNALI1O14645 258 aaPredicted RBP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 HPGDP15428 266 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 MMRN1Q13201 1228 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 NAB2Q15742 525 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 EFL1Q7Z2Z2 1120 aaKnown RBP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 KIRREL3Q8IZU9 778 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 WDR36Q8NI36 951 aaKnown RBP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 BCL2L14Q9BZR8 327 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 SERHL2Q9H4I8 314 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 SERHLQ9NQF3 203 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 HEY2Q9UBP5 337 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 TGM2P21980 687 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 GSSP48637 474 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 SLC29A2Q14542 456 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 PHTF1Q9UMS5 762 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 N6AMT1Q9Y5N5 214 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 MAP2P11137 1827 aaKnown RBP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 PPP1R3GB7ZBB8 358 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 FOXN3O00409 490 aaPredicted RBP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 P4HA2O15460 535 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 PCDH8O95206 1070 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 EGFRP00533 1210 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 PTPRAP18433 802 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 Q4G0T1 1027 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 NEK10Q6ZWH5 1172 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 NACC2Q96BF6 587 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 ZNF333Q96JL9 665 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 RMND5AQ9H871 391 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 POLG2Q9UHN1 485 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 KLHL20Q9Y2M5 609 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 NKRFO15226 690 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 UGT3A1Q6NUS8 523 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 GPRC5DQ9NZD1 345 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 AP4S1Q9Y587 144 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 SNX8Q9Y5X2 465 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 SNTNA6NMZ2 147 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 STX7O15400 261 aaKnown RBP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 PPATQ06203 517 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 TCEA2Q15560 299 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 TSC22D1Q15714 1073 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 DENND1BQ6P3S1 775 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 FAM131BQ86XD5 332 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 LRRC34Q8IZ02 419 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 REPS2Q8NFH8 660 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 NFKBIZQ9BYH8 718 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 UNKQ9C0B0 810 aaKnown RBP14.72□□□□□ -0.05
TRAF1-201ENST00000373887 RSAD1Q9HA92 442 aa14.72□□□□□ -0.05
TRAF1-201ENST00000373887 YWHAQP27348 245 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 CHRNB3Q05901 458 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 ATP1A4Q13733 1029 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 ILKAPQ9H0C8 392 aaPredicted RBP14.71□□□□□ -0.05
TRAF1-201ENST00000373887 AVENQ9NQS1 362 aaPredicted RBP14.71□□□□□ -0.05
TRAF1-201ENST00000373887 KLHL1Q9NR64 748 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 MAPK9P45984 424 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 NR1I3Q14994 352 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 NAPEPLDQ6IQ20 393 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 EPHX4Q8IUS5 362 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 AHI1Q8N157 1196 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 EPS8L3Q8TE67 593 aaKnown RBP14.71□□□□□ -0.05
TRAF1-201ENST00000373887 RNFT2Q96EX2 444 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 KCNF1Q9H3M0 494 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 OSGEPL1Q9H4B0 414 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 PTPRHQ9HD43 1115 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 TCRBV5S4A2TA0A5A2 114 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 PON1P27169 355 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 CAMK2GQ13555 558 aaPredicted RBP14.71□□□□□ -0.05
TRAF1-201ENST00000373887 ZSWIM7Q19AV6 140 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 SCARA3Q6AZY7 606 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 EMC1Q8N766 993 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 FAM172AQ8WUF8 416 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 UCMAQ8WVF2 138 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 APOL2Q9BQE5 337 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 IARS2Q9NSE4 1012 aaKnown RBP14.71□□□□□ -0.05
TRAF1-201ENST00000373887 CTNNAL1Q9UBT7 734 aa14.71□□□□□ -0.05
TRAF1-201ENST00000373887 FAM86B1E9PN63 330 aa14.71□□□□□ -0.06
TRAF1-201ENST00000373887 FAM86B2P0C5J1 330 aa14.71□□□□□ -0.06
TRAF1-201ENST00000373887 TKTL1P51854 596 aa14.71□□□□□ -0.06
TRAF1-201ENST00000373887 OXCT1P55809 520 aa14.71□□□□□ -0.06
TRAF1-201ENST00000373887 RNASE11Q8TAA1 199 aaKnown RBP14.71□□□□□ -0.06
TRAF1-201ENST00000373887 RNASEH1O60930 286 aaKnown RBP14.71□□□□□ -0.06
TRAF1-201ENST00000373887 AGAP9Q5VTM2 703 aa14.71□□□□□ -0.06
TRAF1-201ENST00000373887 CYP4Z1Q86W10 505 aa14.71□□□□□ -0.06
TRAF1-201ENST00000373887 REXO4Q9GZR2 422 aaKnown RBP14.71□□□□□ -0.06
TRAF1-201ENST00000373887 C17orf75Q9HAS0 396 aa14.71□□□□□ -0.06
TRAF1-201ENST00000373887 ABCB1P08183 1280 aaPredicted RBP14.7□□□□□ -0.06
TRAF1-201ENST00000373887 RBP3P10745 1247 aa14.7□□□□□ -0.06
TRAF1-201ENST00000373887 COILP38432 576 aaPredicted RBP14.7□□□□□ -0.06
TRAF1-201ENST00000373887 MAPK11Q15759 364 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms