RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 PNPOQ9NVS9 261 aa14.17□□□□□ -0.14
USP49-201ENST00000373006 THAP1Q9NVV9 213 aa14.17□□□□□ -0.14
USP49-201ENST00000373006 GPATCH2LQ9NWQ4 482 aa14.17□□□□□ -0.14
USP49-201ENST00000373006 SLC15A5A6NIM6 579 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 H0YCG3 227 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 SIN3BO75182 1162 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 APOEP02649 317 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 PABPC4LP0CB38 370 aaKnown RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 VAV1P15498 845 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 AOC1P19801 751 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 ABCD1P33897 745 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 GRIA1P42261 906 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 COPAP53621 1224 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 IGBP1P78318 339 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 NOMO1Q15155 1222 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 C15orf59Q2T9L4 293 aaPredicted RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 MFSD4BQ5TF39 518 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 PIWIL2Q8TC59 973 aaKnown RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 MPP4Q96JB8 637 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 ZNF277Q9NRM2 450 aaPredicted RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 IL1RAPL1Q9NZN1 696 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 TDRKHQ9Y2W6 561 aaKnown RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 CNTNAP1P78357 1384 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 CAPN8A6NHC0 703 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 CHADO15335 359 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 KRT19P08727 400 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 WASHC5Q12768 1159 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 TUBB3Q13509 450 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 SCYL2Q6P3W7 929 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 AAGABQ6PD74 315 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 CDR2LQ86X02 465 aaPredicted RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 XYLT1Q86Y38 959 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 NME8Q8N427 588 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 ZNF668Q96K58 619 aaPredicted RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 RSAD1Q9HA92 442 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 PIH1D1Q9NWS0 290 aaKnown RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 CDH22Q9UJ99 828 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 PCDHGB4Q9UN71 923 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 PCDHGB5Q9Y5G0 923 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 FAM163BP0C2L3 166 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 YWHAEP62258 255 aaKnown RBP14.16□□□□□ -0.14
USP49-201ENST00000373006 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 PNPLA8Q9NP80 782 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 POMPQ9Y244 141 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 TBC1D30Q9Y2I9 924 aa14.16□□□□□ -0.14
USP49-201ENST00000373006 ATG7O95352 703 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 ASNSP08243 561 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 DESP17661 470 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 PRKCHP24723 683 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 CCND2P30279 289 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 CRHR1P34998 444 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 SLC1A6P48664 564 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 FOLH1Q04609 750 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 TTLL12Q14166 644 aaPredicted RBP14.15□□□□□ -0.14
USP49-201ENST00000373006 TBCCQ15814 346 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 LCA5Q86VQ0 697 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 DEPDC1BQ8WUY9 529 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 ZNF180Q9UJW8 692 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 PCDHGC3Q9UN70 934 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 NR2E3Q9Y5X4 410 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 OATP04181 439 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 CRADDP78560 199 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 XKR3Q5GH77 459 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 FAM102AQ5T9C2 384 aaPredicted RBP14.15□□□□□ -0.14
USP49-201ENST00000373006 MAVSQ7Z434 540 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 PORCNQ9H237 461 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 MAN1C1Q9NR34 630 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 BLOC1S6Q9UL45 172 aa14.15□□□□□ -0.14
USP49-201ENST00000373006 COQ9O75208 318 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ZBED1O96006 694 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 GSRP00390 522 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 HMGCRP04035 888 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 CD1EP15812 388 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ADORA2AP29274 412 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 CDH5P33151 784 aaPredicted RBP14.14□□□□□ -0.15
USP49-201ENST00000373006 ASPAP45381 313 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 COG7P83436 770 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 PABPC1LQ4VXU2 614 aaKnown RBP14.14□□□□□ -0.15
USP49-201ENST00000373006 TEDDM1Q5T9Z0 273 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 N4BP2L1Q5TBK1 243 aaPredicted RBP14.14□□□□□ -0.15
USP49-201ENST00000373006 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ABHD15Q6UXT9 468 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 FRMD7Q6ZUT3 714 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 PHTF2Q8N3S3 785 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 RDM1Q8NG50 284 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 RNF146Q9NTX7 359 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ZDHHC7Q9NXF8 308 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 PAK5Q9P286 719 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ATXN10Q9UBB4 475 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 FZD1Q9UP38 647 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 INPP5FQ9Y2H2 1132 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 MSX2P35548 267 aaPredicted RBP14.14□□□□□ -0.15
USP49-201ENST00000373006 GALK1P51570 392 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 CHN2P52757 468 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 SP2Q02086 613 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 DUOXA2Q1HG44 320 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ADGRG6Q86SQ4 1221 aa14.14□□□□□ -0.15
USP49-201ENST00000373006 ICA1LQ8NDH6 482 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms