RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SLC2A4P14672 509 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 TCF3P15923 654 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 GARTP22102 1010 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 PTPN11Q06124 597 aaPredicted RBP24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 ATP1A4Q13733 1029 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 STYK1Q6J9G0 422 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 XRRA1Q6P2D8 792 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 MED8Q96G25 268 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 ATXN3LQ9H3M9 355 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 TISP43B9A030 160 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 HALP42357 657 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 HUNKP57058 714 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 TTLL9Q3SXZ7 439 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 GDPD5Q8WTR4 605 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 CNPY3Q9BT09 278 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 NINJ2Q9NZG7 142 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 RARAP10276 462 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 ETS1P14921 441 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 SCNN1BP51168 640 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 CACNA2D1P54289 1103 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 ZNF844Q08AG5 666 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 CLPTM1O96005 669 aa24.58■■□□□ 1.52
RAPGEF1-203ENST00000372195 AMPD1P23109 780 aa24.58■■□□□ 1.52
RAPGEF1-203ENST00000372195 ERVK-9P63128 1117 aa24.58■■□□□ 1.52
RAPGEF1-203ENST00000372195 ZBTB49Q6ZSB9 765 aa24.58■■□□□ 1.52
RAPGEF1-203ENST00000372195 TMC3Q7Z5M5 1100 aa24.58■■□□□ 1.52
RAPGEF1-203ENST00000372195 TM9SF1O15321 606 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 NDST1P52848 882 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 VAC14Q08AM6 782 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 SCUBE3Q8IX30 993 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 MTFMTQ96DP5 389 aaKnown RBP24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 PDGFCQ9NRA1 345 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 PTPRMP28827 1452 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 CBX6O95503 412 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 ST3GAL1Q11201 340 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 CTXN3Q4LDR2 81 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 FGD2Q7Z6J4 655 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 TRAPPC12Q8WVT3 735 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 DCLRE1BQ9H816 532 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 VPS28Q9UK41 221 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 TSPAN16Q9UKR8 245 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 A8MX80 341 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 ZSCAN5DPP0CG00 497 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 IL5RAQ01344 420 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 VPS72Q15906 364 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 C3orf20Q8ND61 904 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 DDX18Q9NVP1 670 aaKnown RBP24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 ZSCAN32Q9NX65 697 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 PADI4Q9UM07 663 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 FZD1Q9UP38 647 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 ADIGQ0VDE8 80 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 ILDR1Q86SU0 546 aaPredicted RBP24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 LUZP2Q86TE4 346 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 ABRAQ8N0Z2 381 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 CLPBQ9H078 707 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 SETD4Q9NVD3 440 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 ACOT9Q9Y305 439 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 GZMAP12544 262 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 OTUD3Q5T2D3 398 aaPredicted RBP24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 LPCAT1Q8NF37 534 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 DDI1Q8WTU0 396 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 SOX13Q9UN79 622 aa24.57■■□□□ 1.52
RAPGEF1-203ENST00000372195 CCNG1P51959 295 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 TSEN2Q8NCE0 465 aaKnown RBP24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 PNMA5Q96PV4 448 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 NCOA3Q9Y6Q9 1424 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 FAM86B1E9PN63 330 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 PGM5Q15124 567 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 CYP2R1Q6VVX0 501 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 FAR2Q96K12 515 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 DDX43Q9NXZ2 648 aaKnown RBP24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 DNPEPQ9ULA0 475 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 UBDO15205 165 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 SH3BGRLO75368 114 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 RRM2P31350 389 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 FGFR3P22607 806 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 DNAJB2P25686 324 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 FIGNQ5HY92 759 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 ZNF484Q5JVG2 852 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 SAE1Q9UBE0 346 aaPredicted RBP24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 TCRBV5S4A2TA0A5A2 114 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 SLC2A3P11169 496 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 PEX5P50542 639 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 PPP1R13LQ8WUF5 828 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 MARK4Q96L34 752 aa24.56■■□□□ 1.52
RAPGEF1-203ENST00000372195 PAX7P23759 505 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 CAMK2GQ13555 558 aaPredicted RBP24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 PACS2Q86VP3 889 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 ANKRD13AQ8IZ07 590 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 CCDC126Q96EE4 140 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 RHOCP08134 193 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 CCDC130P13994 396 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 RAG1P15918 1043 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 PECAM1P16284 738 aaPredicted RBP24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 ATG16L2Q8NAA4 619 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 COPG1Q9Y678 874 aaKnown RBP24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 GPR182O15218 404 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 ABCG1P45844 678 aa24.55■■□□□ 1.52
RAPGEF1-203ENST00000372195 RHOAP61586 193 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms