RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 PAFAH2Q99487 392 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 FERMT1Q9BQL6 677 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 AP4E1Q9UPM8 1137 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 TP73O15350 636 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 TFE3P19532 575 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-205ENST00000372067 AMPD1P23109 780 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 BCAT1P54687 386 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 CDC42EP1Q00587 391 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 BST2Q10589 180 aaKnown RBP17.69■□□□□ 0.42
VEGFA-205ENST00000372067 SDCCAG8Q86SQ7 713 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-205ENST00000372067 SLC35B4Q969S0 331 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 MAGEB5Q9BZ81 275 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 SPC25Q9HBM1 224 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 PARP14Q460N5 1801 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 CCDC15Q0P6D6 951 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 AP1B1Q10567 949 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 KLHL38Q2WGJ6 581 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 HEATR6Q6AI08 1181 aaKnown RBP17.69■□□□□ 0.42
VEGFA-205ENST00000372067 CXCL17Q6UXB2 119 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 TMEM40Q8WWA1 233 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 C12orf65Q9H3J6 166 aaKnown RBP17.69■□□□□ 0.42
VEGFA-205ENST00000372067 PLEKHA5Q9HAU0 1116 aa17.69■□□□□ 0.42
VEGFA-205ENST00000372067 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-205ENST00000372067 TMEM63AO94886 807 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 STIP1P31948 543 aaKnown RBP17.68■□□□□ 0.42
VEGFA-205ENST00000372067 IRX4P78413 519 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 NR1H3Q13133 447 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 MPP2Q14168 576 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 SV2CQ496J9 727 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 MSS51Q4VC12 460 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 LVRNQ6Q4G3 990 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 TRPM8Q7Z2W7 1104 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 KCNN1Q92952 543 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 LPPQ93052 612 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 SRRM3A6NNA2 597 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-205ENST00000372067 ALOX15BO15296 676 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 ZNF189O75820 626 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-205ENST00000372067 PGK1P00558 417 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 PDHA1P08559 390 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 PCK1P35558 622 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 MAP3K7CLP57077 242 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 ZBTB16Q05516 673 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 MDH1BQ5I0G3 518 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 WSCD1Q658N2 575 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 DEFB106AQ8N104 65 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 CMASQ8NFW8 434 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-205ENST00000372067 HASPINQ8TF76 798 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 PCDH18Q9HCL0 1135 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.68■□□□□ 0.424e-6■□□□□ 10.5
VEGFA-205ENST00000372067 ZC3H7BQ9UGR2 993 aaKnown RBP17.68■□□□□ 0.42
VEGFA-205ENST00000372067 KBTBD13C9JR72 458 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 PDLIM1O00151 329 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 FSCN1Q16658 493 aaKnown RBP17.68■□□□□ 0.42
VEGFA-205ENST00000372067 DRICH1Q6PGQ1 229 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-205ENST00000372067 HACE1Q8IYU2 909 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 ABCF3Q9NUQ8 709 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 PAK5Q9P286 719 aa17.68■□□□□ 0.42
VEGFA-205ENST00000372067 CASTOR2A6NHX0 329 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 ACAP1Q15027 740 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 PDK2Q15119 407 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 SPOCK2Q92563 424 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 IFT43Q96FT9 208 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 GAD1Q99259 594 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 CYTH2Q99418 400 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 SUN2Q9UH99 717 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 DCTN4Q9UJW0 460 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 IPPQ9Y573 584 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 MRPL42Q9Y6G3 142 aaKnown RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 BRCA1P38398 1863 aaKnown RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 RPA3P35244 121 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 TAF11Q15544 211 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 TRNP1Q6NT89 227 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 PPP1R14CQ8TAE6 165 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 ADAMTS10Q9H324 1103 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 ZNFX1Q9P2E3 1918 aaKnown RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 SMIM35A0A1B0GVV1 85 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 I3L4J1 428 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 M0QYT0 321 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 STK10O94804 968 aaKnown RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 SESN2P58004 480 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 GBE1Q04446 702 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 INCA1Q0VD86 236 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 PTK7Q13308 1070 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 ZNF467Q7Z7K2 595 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 RSPH3Q86UC2 560 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 PIGZQ86VD9 579 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 CDKL3Q8IVW4 592 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 PLD5Q8N7P1 536 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 ZNF317Q96PQ6 595 aaPredicted RBP17.67■□□□□ 0.42
VEGFA-205ENST00000372067 SLC13A1Q9BZW2 595 aa17.67■□□□□ 0.42
VEGFA-205ENST00000372067 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-205ENST00000372067 PYROXD2Q8N2H3 581 aa17.66■□□□□ 0.42
VEGFA-205ENST00000372067 RIBC1Q8N443 379 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-205ENST00000372067 SLC7A14Q8TBB6 771 aa17.66■□□□□ 0.42
VEGFA-205ENST00000372067 TBCBQ99426 244 aa17.66■□□□□ 0.42
VEGFA-205ENST00000372067 MLH1P40692 756 aa17.66■□□□□ 0.42
VEGFA-205ENST00000372067 RGS2P41220 211 aa17.66■□□□□ 0.42
VEGFA-205ENST00000372067 NOMO1Q15155 1222 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms