RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 STX18Q9P2W9 335 aaKnown RBP11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 POLIQ9UNA4 740 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 STYXL1Q9Y6J8 313 aa11.91□□□□□ -0.5
TSPAN1-201ENST00000372003 EME2A4GXA9 379 aaPredicted RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 ENO4A6NNW6 628 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 TBKBP1A7MCY6 615 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 F8W8V4 182 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 OGTO15294 1046 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 GSC2O15499 205 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 SPAG7O75391 227 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 RECQL4O94761 1208 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 ADRB2P07550 413 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 GARTP22102 1010 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 RPA3P35244 121 aaPredicted RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 PBX2P40425 430 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 MLH1P40692 756 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 GRM5P41594 1212 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 NSFP46459 744 aaKnown RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 AFF1P51825 1210 aaKnown RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 CDK18Q07002 472 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 AP1B1Q10567 949 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 SLC1A5Q15758 541 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 CCDC6Q16204 474 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 PDCD2Q16342 344 aaPredicted RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 CLLU1OSQ5K130 101 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 DAB2IPQ5VWQ8 1189 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 OR52E8Q6IFG1 317 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 PLEKHA7Q6IQ23 1121 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 ZNF449Q6P9G9 518 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 MON1BQ7L1V2 547 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 GSTA5Q7RTV2 222 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 CHSY1Q86X52 802 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 PHF13Q86YI8 300 aaPredicted RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 ALLCQ8N6M5 410 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 NKD2Q969F2 451 aaPredicted RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 PTCD3Q96EY7 689 aaKnown RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 ZFP42Q96MM3 310 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 RAD9AQ99638 391 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 SYT15Q9BQS2 421 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 HERPUD2Q9BSE4 406 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 TRIM55Q9BYV6 548 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 CXCL16Q9H2A7 254 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 SLCO1B3Q9NPD5 702 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 WDR35Q9P2L0 1181 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 CHORDC1Q9UHD1 332 aaPredicted RBP11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 INSL6Q9Y581 213 aa11.9□□□□□ -0.5
TSPAN1-201ENST00000372003 CEP290O15078 2479 aa11.9□□□□□ -0.51
TSPAN1-201ENST00000372003 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 FOXO6A8MYZ6 492 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 MAGEC1O60732 1142 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 FAM155BO75949 473 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CBX6O95503 412 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 POMCP01189 267 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 ITGAVP06756 1048 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CDC25CP30307 473 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CBLBQ13191 982 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 SEPT7Q16181 437 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 SNX30Q5VWJ9 437 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 LVRNQ6Q4G3 990 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 ADGRD1Q6QNK2 874 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 GLB1LQ6UWU2 654 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 EGFL6Q8IUX8 553 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 DTNBP1Q96EV8 351 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CASD1Q96PB1 797 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CADM1Q9BY67 442 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 PCDH9Q9HC56 1237 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 DDX43Q9NXZ2 648 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 IP6K2Q9UHH9 426 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 GRID1Q9ULK0 1009 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 EFR3BQ9Y2G0 817 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 GIT1Q9Y2X7 761 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 PDE4DIPQ5VU43 2346 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 ARL5CA6NH57 179 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 POC1B-GALNT4F8VUJ3 575 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 HOXA2O43364 376 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 FAM189A1O60320 539 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 RTN3O95197 1032 aaPredicted RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 PSMG1O95456 288 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 LDHAP00338 332 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CXCL8P10145 99 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 SCNN1GP51170 649 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 RAP1GDS1P52306 607 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CDK16Q00536 496 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 BIRC2Q13490 618 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 KHDC1Q4VXA5 237 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 GLRA4Q5JXX5 417 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 RNASEH2BQ5TBB1 312 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 LRRC74BQ6ZQY2 392 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 GPD1LQ8N335 351 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 ZNF276Q8N554 614 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 ATP11CQ8NB49 1132 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 SKA1Q96BD8 255 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms