RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ADAM12O43184 909 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 DAPK3O43293 454 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 URODP06132 367 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 RPL17P18621 184 aaKnown RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 TUFMP49411 452 aaKnown RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 KRT17Q04695 432 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 ARL13BQ3SXY8 428 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 EFHC2Q5JST6 749 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 GSPT2Q8IYD1 628 aaKnown RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 ADAM32Q8TC27 787 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 NKD2Q969F2 451 aaPredicted RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 FAM118BQ9BPY3 351 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 CLSTN3Q9BQT9 956 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 WDR6Q9NNW5 1121 aaKnown RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 RCOR3Q9P2K3 495 aaPredicted RBP27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 DNPEPQ9ULA0 475 aa27.34■■□□□ 1.97
ATPAF1-202ENST00000371937 FAM92AA1XBS5 289 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 YWHAQP27348 245 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 HLTFQ14527 1009 aaKnown RBP eCLIP27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 TRADDQ15628 312 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 TPGS2Q68CL5 300 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 SCD5Q86SK9 330 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 GPR65Q8IYL9 337 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 DPH5Q9H2P9 285 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 CRISPLD1Q9H336 500 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 MTMR10Q9NXD2 777 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 HSFX1Q9UBD0 423 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 AFF4Q9UHB7 1163 aaKnown RBP27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 FBXW11Q9UKB1 542 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 ZNF148Q9UQR1 794 aa27.33■■□□□ 1.97
ATPAF1-202ENST00000371937 PTPRSQ13332 1948 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 ADRA1BP35368 520 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 ARL4AP40617 200 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 VCPP55072 806 aaKnown RBP27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 OTUD4Q01804 1114 aaKnown RBP27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 ZNF461Q8TAF7 563 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 ACTL9Q8TC94 416 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 DQX1Q8TE96 717 aaKnown RBP27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 RNF139Q8WU17 664 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 HAUS1Q96CS2 278 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 TRIM31Q9BZY9 425 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 PRDM16Q9HAZ2 1276 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 CXCR3P49682 368 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 SCAPQ12770 1279 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 HDXQ7Z353 690 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 TAC4Q86UU9 113 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 DDX42Q86XP3 938 aaKnown RBP eCLIP27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 VPS52Q8N1B4 723 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 SLC35B2Q8TB61 432 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 HERVK_113Q902F9 699 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 KCTD15Q96SI1 283 aaPredicted RBP27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 HTATIP2Q9BUP3 242 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 CXXC1Q9P0U4 656 aaPredicted RBP27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 SLC4A7Q9Y6M7 1214 aa27.32■■□□□ 1.96
ATPAF1-202ENST00000371937 A0A1W2PQH9 124 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 APOL1O14791 398 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 SOAT2O75908 522 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 ITGAVP06756 1048 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 ZFXP17010 805 aaPredicted RBP27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 TGM2P21980 687 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 USP46P62068 366 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 PTK6Q13882 451 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 SLC9A4Q6AI14 798 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 GSTA5Q7RTV2 222 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 PCDH19Q8TAB3 1148 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 PHOSPHO2Q8TCD6 241 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 P3H4Q92791 437 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 SMOC2Q9H3U7 446 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 WDCPQ9H6R7 721 aa27.31■■□□□ 1.96
ATPAF1-202ENST00000371937 ABLIM3O94929 683 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 IGLV3-25P01717 112 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 PSEN1P49768 467 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 OASLQ15646 514 aaKnown RBP27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 GPR152Q8TDT2 470 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 CLP1Q92989 425 aaKnown RBP27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 RAD9AQ99638 391 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 NMUR1Q9HB89 426 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 MRPL17Q9NRX2 175 aaKnown RBP27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 CREMQ03060 361 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 NNTQ13423 1086 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 HERC6Q8IVU3 1022 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 PQLC3Q8N755 202 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 STKLD1Q8NE28 680 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 CCHCR1Q8TD31 782 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 CAVIN3Q969G5 261 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 FBXO32Q969P5 355 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 CSPG4P5Q96PW8 444 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 FUT8Q9BYC5 575 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 MTIF3Q9H2K0 278 aaKnown RBP27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 SAE1Q9UBE0 346 aaPredicted RBP27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 SNX24Q9Y343 169 aa27.3■■□□□ 1.96
ATPAF1-202ENST00000371937 MCF2LO15068 1137 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 FGF18O76093 207 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 ATF2P15336 505 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 TNNT3P45378 269 aaPredicted RBP27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 PLD5Q8N7P1 536 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 CCDC89Q8N998 374 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 RNF34Q969K3 372 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 TLR8Q9NR97 1041 aaKnown RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms