RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MAGEE2Q8TD90 523 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 GPC6Q9Y625 555 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 SDR42E2A6NKP2 422 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 PSIP1O75475 530 aaKnown RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 PROCP04070 461 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 NFICP08651 508 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 PRKCQQ04759 706 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 TTLL9Q3SXZ7 439 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 BHLHB9Q6PI77 547 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 DCLK3Q9C098 648 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 SMCO3A2RU48 225 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 TEX46H3BTG2 121 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 MOCS2O96007 188 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 KPNA1P52294 538 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 ITGA9Q13797 1035 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 ZNF285Q96NJ3 590 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 PADI4Q9UM07 663 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 GP5P40197 560 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 CCNHP51946 323 aaPredicted RBP15.67■□□□□ 0.1
COL5A1-201ENST00000371817 SWI5Q1ZZU3 235 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 TNIP3Q96KP6 325 aa15.67■□□□□ 0.1
COL5A1-201ENST00000371817 SFNP31947 248 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 PTSQ03393 145 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 PLET1Q6UQ28 207 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 SPAG16Q8N0X2 631 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 TRPM5Q9NZQ8 1165 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 TMEM253P0C7T8 217 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 PPP1R18Q6NYC8 613 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 SP140LQ9H930 580 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 EEF2KO00418 725 aaKnown RBP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 GPC1P35052 558 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 ZCCHC8Q6NZY4 707 aaKnown RBP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 GALNT6Q8NCL4 622 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 ITFG2Q969R8 447 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 KIAA1683Q9H0B3 1180 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 RAD18Q9NS91 495 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 ZDHHC9Q9Y397 364 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 H3BNX3 289 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 DYNC1LI2O43237 492 aaPredicted RBP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 ACAP2Q15057 778 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 PHKG1Q16816 387 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 FBXO36Q8NEA4 188 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 CHCHD6Q9BRQ6 235 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 SQORQ9Y6N5 450 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 TMEM114B3SHH9 223 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 CBX6O95503 412 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 DPYDQ12882 1025 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 CYP2R1Q6VVX0 501 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 BHMTQ93088 406 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 PABPC5Q96DU9 382 aaKnown RBP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 CDRT15Q96T59 188 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 YIPF2Q9BWQ6 316 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 PCDHA6Q9UN73 950 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 PCDHA8Q9Y5H6 950 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 ARPC4-TTLL3A0A0A6YYG9 625 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 DDR1Q08345 913 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 BPIFB6Q8NFQ5 453 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 SPPL2AQ8TCT8 520 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 TBC1D22BQ9NU19 505 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 ARMCX1Q9P291 453 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 CCSAPQ6IQ19 270 aaPredicted RBP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 ZNF677Q86XU0 584 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 Q96MT0 163 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 TRIM9Q9C026 710 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 CATSPERBQ9H7T0 1116 aa15.66■□□□□ 0.1
COL5A1-201ENST00000371817 CNOT7Q9UIV1 285 aaKnown RBP15.66■□□□□ 0.1
COL5A1-201ENST00000371817 APOL3O95236 402 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 RAP1GAPP47736 663 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 FOXR1Q6PIV2 292 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 ARMC7Q9H6L4 198 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 RPS6KB2Q9UBS0 482 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 SIK3Q9Y2K2 1263 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 NCKAP5LQ9HCH0 1330 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 FANCAO15360 1455 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 ZBTB5O15062 677 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 KLRC1P26715 233 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 DSG3P32926 999 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 NAA20P61599 178 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 COPZ1P61923 177 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 TXNDC11Q6PKC3 985 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 COMMD2Q86X83 199 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 RAB43Q86YS6 212 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 EEF1AKMT1Q8WVE0 214 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 GLRBP48167 497 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 C15orf59Q2T9L4 293 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 FBXO9Q9UK97 447 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 RPN2P04844 631 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 PCCAP05165 728 aaPredicted RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 GSTM5P46439 218 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 TWF2Q6IBS0 349 aaKnown RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 LXNQ9BS40 222 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 CHST12Q9NRB3 414 aa15.65■□□□□ 0.1
COL5A1-201ENST00000371817 DNMT1P26358 1616 aaKnown RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
COL5A1-201ENST00000371817 FAM25EA8MYX2 175 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms