RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 EMC1Q8N766 993 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 PIWIL2Q8TC59 973 aaKnown RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 GANQ9H2C0 597 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 TIMMDC1Q9NPL8 285 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 ETNK2Q9NVF9 386 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 PIH1D1Q9NWS0 290 aaKnown RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 CHKBQ9Y259 395 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 IPPQ9Y573 584 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 PCDHA10Q9Y5I2 948 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 PRR23D1E9PI22 279 aaPredicted RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 TRIM24O15164 1050 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 HSMCR30P0CW71 290 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 PRR23D2P0DMB1 279 aaPredicted RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 TPI1P60174 286 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 SPDYAQ5MJ70 313 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 RBM15BQ8NDT2 890 aaKnown RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 TMEM245Q9H330 911 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 KCTD10Q9H3F6 313 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 WDR41Q9HAD4 459 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 GPRC5CQ9NQ84 441 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 AREL1O15033 823 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 UBDO15205 165 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 SPIDRQ14159 915 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 POLD3Q15054 466 aaPredicted RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 ATG14Q6ZNE5 492 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 NCCRP1Q6ZVX7 275 aaPredicted RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 PURBQ96QR8 312 aaKnown RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 SPATA16Q9BXB7 569 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 CHST12Q9NRB3 414 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 ABCB10Q9NRK6 738 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 MRPL39Q9NYK5 338 aaKnown RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 SLC17A7Q9P2U7 560 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 SLC13A4Q9UKG4 626 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 CROTQ9UKG9 612 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 GPC6Q9Y625 555 aaPredicted RBP13.05□□□□□ -0.32
GPC4-201ENST00000370828 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
GPC4-201ENST00000370828 PAEPP09466 180 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 VDRP11473 427 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 VEGFAP15692 232 aaPredicted RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 LSM3P62310 102 aaKnown RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 CBWD6Q4V339 395 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 RUNDC3AQ59EK9 446 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 CBWD3Q5JTY5 395 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 CBWD5Q5RIA9 395 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 AAGABQ6PD74 315 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 AMIGO2Q86SJ2 522 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 LUZP2Q86TE4 346 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 BORCS5Q969J3 196 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 COL15A1P39059 1388 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 CPS1P31327 1500 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 BBOX1O75936 387 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 ITGA2BP08514 1039 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 AP3M2P53677 418 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 DGUOKQ16854 277 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 MAGED4Q96JG8 741 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 CADM1Q9BY67 442 aaKnown RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 S100A14Q9HCY8 104 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 C12orf4Q9NQ89 552 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 CCDC167Q9P0B6 97 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SYNDIG1LA6NDD5 238 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 IDH3BO43837 385 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 MOCS2O96007 188 aaPredicted RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 CYP19A1P11511 503 aaPredicted RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 DGCR6Q14129 220 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 ZNF720Q7Z2F6 126 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 RDM1Q8NG50 284 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 RORBQ92753 470 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 KAT5Q92993 513 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SH3KBP1Q96B97 665 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 ZNF333Q96JL9 665 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 MECRQ9BV79 373 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 KLHL31Q9H511 634 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 AASDHPPTQ9NRN7 309 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 TELO2Q9Y4R8 837 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SETBP1Q9Y6X0 1596 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 RNF17Q9BXT8 1623 aaKnown RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 TCHHQ07283 1943 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 F8W8V4 182 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 FANCGO15287 622 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 FOSL2P15408 326 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SOX6P35712 828 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SULT1E1P49888 294 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 CASP5P51878 434 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 ORC1Q13415 861 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 MAPRE1Q15691 268 aaKnown RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 Q3C1V9 767 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SHCBP1Q8NEM2 672 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 TSPAN17Q96FV3 270 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 ZNF302Q9NR11 478 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 MAN1C1Q9NR34 630 aa13.04□□□□□ -0.32
GPC4-201ENST00000370828 SAE1Q9UBE0 346 aaPredicted RBP13.04□□□□□ -0.32
GPC4-201ENST00000370828 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 SUPT3HB4E1H0 165 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 MRASO14807 208 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 RGS20O76081 388 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 SEZ6Q53EL9 994 aa13.03□□□□□ -0.32
GPC4-201ENST00000370828 MFSD5Q6N075 450 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms