RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 DONSONQ9NYP3 566 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 GMEB2Q9UKD1 530 aa15.7■□□□□ 0.1
LMO4-201ENST00000370542 ASH1LQ9NR48 2969 aaKnown RBP15.7■□□□□ 0.1
LMO4-201ENST00000370542 CHUKO15111 745 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 RETP07949 1114 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 USP17L7P0C7H9 530 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 ARSAP15289 507 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 ATICP31939 592 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 GNL1P36915 607 aaPredicted RBP15.69■□□□□ 0.1
LMO4-201ENST00000370542 PAFAH1B1P43034 410 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 VAV2P52735 878 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 STX17P56962 302 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 NOP14P78316 857 aaKnown RBP15.69■□□□□ 0.1
LMO4-201ENST00000370542 WDR5BQ86VZ2 330 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 SLC9A9Q8IVB4 645 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 KDF1Q8NAX2 398 aaPredicted RBP15.69■□□□□ 0.1
LMO4-201ENST00000370542 RDH13Q8NBN7 331 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 PLEKHO2Q8TD55 490 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 OSCP1Q8WVF1 389 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 NELFBQ8WX92 580 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 C8orf48Q96LL4 319 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 FNBP1Q96RU3 617 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 CYP2S1Q96SQ9 504 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 MRPL45Q9BRJ2 306 aaKnown RBP15.69■□□□□ 0.1
LMO4-201ENST00000370542 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 ARHGAP26Q9UNA1 814 aa15.69■□□□□ 0.1
LMO4-201ENST00000370542 TRAV19A0A0A6YYK7 116 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 GOLGA6L7A0A1B0GV03 622 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 BICDL2A1A5D9 508 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 H0YHG0 523 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 AGPSO00116 658 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 OLFM2O95897 454 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 ATP1A1P05023 1023 aaKnown RBP15.68■□□□□ 0.1
LMO4-201ENST00000370542 DLATP10515 647 aaKnown RBP15.68■□□□□ 0.1
LMO4-201ENST00000370542 TNNI1P19237 187 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 DRD1P21728 446 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 BDNFP23560 247 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 GJA4P35212 333 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 AFMP43652 599 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 PPP3CCP48454 512 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 FNTBP49356 437 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 CYP2J2P51589 502 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 USP46P62068 366 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 PSMC1P62191 440 aaKnown RBP15.68■□□□□ 0.1
LMO4-201ENST00000370542 ZXDBP98169 803 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 GRSF1Q12849 480 aaKnown RBP eCLIP15.68■□□□□ 0.1
LMO4-201ENST00000370542 EML3Q32P44 896 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 PKN3Q6P5Z2 889 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 KDM7AQ6ZMT4 941 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 DENND5BQ6ZUT9 1274 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 NELFCDQ8IXH7 590 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 MREGQ8N565 214 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 MAGEC3Q8TD91 643 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 PARD3BQ8TEW8 1205 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
LMO4-201ENST00000370542 VPS16Q9H269 839 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 ECT2Q9H8V3 914 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 FBRSL1Q9HCM7 1045 aaKnown RBP15.68■□□□□ 0.1
LMO4-201ENST00000370542 SLC39A2Q9NP94 309 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 SNX12Q9UMY4 172 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 HYOU1Q9Y4L1 999 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 NBEAQ8NFP9 2946 aa15.68■□□□□ 0.1
LMO4-201ENST00000370542 C2orf78A6NCI8 922 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 ATG13O75143 517 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 PDGFRBP09619 1106 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 PTPN1P18031 435 aaKnown RBP15.67■□□□□ 0.1
LMO4-201ENST00000370542 PDE6CP51160 858 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 GALK1P51570 392 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 AP3M2P53677 418 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 STK4Q13043 487 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 PSMD2Q13200 908 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 WDR72Q3MJ13 1102 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 FBXO43Q4G163 708 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.1
LMO4-201ENST00000370542 SCN4BQ8IWT1 228 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 IFT20Q8IY31 132 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 KIAA0895Q8NCT3 520 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 EZH1Q92800 747 aaPredicted RBP15.67■□□□□ 0.1
LMO4-201ENST00000370542 CCDC127Q96BQ5 260 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 KCTD10Q9H3F6 313 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 LUC7LQ9NQ29 371 aaKnown RBP15.67■□□□□ 0.1
LMO4-201ENST00000370542 TMEM30AQ9NV96 361 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 TAB2Q9NYJ8 693 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 EHD2Q9NZN4 543 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 REXO2Q9Y3B8 237 aaKnown RBP15.67■□□□□ 0.1
LMO4-201ENST00000370542 CEP83Q9Y592 693 aa15.67■□□□□ 0.1
LMO4-201ENST00000370542 HELZP42694 1942 aaKnown RBP15.66■□□□□ 0.1
LMO4-201ENST00000370542 ATG2BQ96BY7 2078 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 SPAG17Q6Q759 2223 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 ZNF840PA6NDX5 716 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 NDUFAB1O14561 156 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 PSMA7O14818 248 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 C4BPAP04003 597 aaKnown RBP15.66■□□□□ 0.1
LMO4-201ENST00000370542 RPN1P04843 607 aaKnown RBP15.66■□□□□ 0.1
LMO4-201ENST00000370542 HDCP19113 662 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 CALRP27797 417 aaKnown RBP15.66■□□□□ 0.1
LMO4-201ENST00000370542 HOXC13P31276 330 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 GRIK1P39086 918 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 LIG3P49916 1009 aa15.66■□□□□ 0.1
LMO4-201ENST00000370542 MYL6P60660 151 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms