RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TEX33O43247 280 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 TGM5O43548 720 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 IBSPP21815 317 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 WARSP23381 471 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 ECHS1P30084 290 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 NMT1P30419 496 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 POLE2P56282 527 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 RPL26P61254 145 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 MRPS5P82675 430 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SP4Q02446 784 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 HAUS6Q7Z4H7 955 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 PASD1Q8IV76 773 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 DNAJC9Q8WXX5 260 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 RAB3IPQ96QF0 476 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 LRMDAQ9H2I8 198 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 ADAM28Q9UKQ2 775 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 PTPRBP23467 1997 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 LACTBL1A8MY62 500 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 CES2O00748 559 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 LILRB5O75023 590 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SERPINB7O75635 380 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 LCA5LO95447 670 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 GAP43P17677 238 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 TRIM21P19474 475 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 ZNF844Q08AG5 666 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 FCHO2Q0JRZ9 810 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 CCDC14Q49A88 953 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 XKR9Q5GH70 373 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 IL23RQ5VWK5 629 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 MAEAQ7L5Y9 396 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 OSTM1Q86WC4 334 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 UTP4Q969X6 686 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 CLDN23Q96B33 292 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 OLFM3Q96PB7 478 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 THAP9Q9H5L6 903 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 PRMT8Q9NR22 394 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 AGPAT3Q9NRZ7 376 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 NEU3Q9UQ49 428 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SMG1Q96Q15 3661 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 GRID2IPA4D2P6 1211 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 KCNJ18B7U540 433 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 KIAA0391O15091 583 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 FOSL2P15408 326 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 TCP1P17987 556 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 PPM1AP35813 382 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 MMP13P45452 471 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SPAG1Q07617 926 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 GRM2Q14416 872 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 KYAT1Q16773 422 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SYCP2LQ5T4T6 812 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 ZNF658Q5TYW1 1059 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 Q6ZNX1 250 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 TBC1D1Q86TI0 1168 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 ADSSL1Q8N142 457 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 LRRC52Q8N7C0 313 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 GDAP1Q8TB36 358 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 FBF1Q8TES7 1133 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SEC14L1Q92503 715 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 INPP5DQ92835 1189 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SPG21Q9NZD8 308 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 NKX1-2Q9UD57 310 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 R3HDM2Q9Y2K5 976 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 FAM32AQ9Y421 112 aaKnown RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 PCDHB7Q9Y5E2 793 aa7.17□□□□□ -1.26
CSDE1-204ENST00000369530 EPN1Q9Y6I3 576 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-204ENST00000369530 SMIM31A0A1B0GVY4 71 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 OGTO15294 1046 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 AP1G1O43747 822 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 ATP5HO75947 161 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 STARD6P59095 220 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 LILRA4P59901 499 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 C2orf54Q08AI8 447 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 LIN52Q52LA3 116 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 SPATA17Q96L03 361 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TXLNGYQ9BZA5 131 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 POMKQ9H5K3 350 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 PPANQ9NQ55 473 aaKnown RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 THEGQ9P2T0 379 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TMEM59LQ9UK28 342 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TCRBV5S1A1TA0A578 114 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TNFRSF10AO00220 468 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 IGLV3-25P01717 112 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 NFICP08651 508 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 SCNN1GP51170 649 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 MTTPP55157 894 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 ARPC4P59998 168 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 IGBP1P78318 339 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 TCF15Q12870 199 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 UAP1Q16222 522 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-204ENST00000369530 CNGA3Q16281 694 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 SOWAHAQ2M3V2 549 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 KCTD16Q68DU8 428 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 DHRS4L2Q6PKH6 230 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 CEP128Q6ZU80 1094 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 GPBP1Q86WP2 473 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 SFR1Q86XK3 245 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 LSMEM2Q8N112 164 aa7.16□□□□□ -1.26
CSDE1-204ENST00000369530 HLA-CQ95604 372 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms