RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 NBPF12Q5TAG4 269 aaPredicted RBP18.65■□□□□ 0.58
SNX27-202ENST00000368841 TIGD7Q6NT04 549 aaPredicted RBP18.65■□□□□ 0.58
SNX27-202ENST00000368841 RNF44Q7L0R7 432 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 VANGL2Q9ULK5 521 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 CSF1RP07333 972 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 UMPSP11172 480 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 LNPEPQ9UIQ6 1025 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 CHURC1-FNTBB4DL54 471 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 OASLQ15646 514 aaKnown RBP18.65■□□□□ 0.58
SNX27-202ENST00000368841 GSTA3Q16772 222 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 OTUD3Q5T2D3 398 aaPredicted RBP18.65■□□□□ 0.58
SNX27-202ENST00000368841 SPOCD1Q6ZMY3 1216 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 PDZK1P1A8MUH7 402 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 MICAL2O94851 1124 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 IGFBP4P22692 258 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 RRM1P23921 792 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 CHRNB3Q05901 458 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 TRIM16LQ309B1 348 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 CCDC149Q6ZUS6 474 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 MARK2Q7KZI7 788 aaKnown RBP18.65■□□□□ 0.58
SNX27-202ENST00000368841 SAPCD2Q86UD0 394 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 CYP4Z1Q86W10 505 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 SCUBE1Q8IWY4 988 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 TMEM176AQ96HP8 235 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 RIT2Q99578 217 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 CARD9Q9H257 536 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 VHLP40337 213 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 PLK1P53350 603 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 MAPK11Q15759 364 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 BNC2Q6ZN30 1099 aaPredicted RBP18.65■□□□□ 0.58
SNX27-202ENST00000368841 ATP8B4Q8TF62 1192 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 KIF2CQ99661 725 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 ALDH8A1Q9H2A2 487 aaPredicted RBP18.65■□□□□ 0.58
SNX27-202ENST00000368841 MPP6Q9NZW5 540 aa18.65■□□□□ 0.58
SNX27-202ENST00000368841 PSMC3P17980 439 aa18.64■□□□□ 0.58
SNX27-202ENST00000368841 EDRF1Q3B7T1 1238 aa18.64■□□□□ 0.58
SNX27-202ENST00000368841 DEFB132Q7Z7B7 95 aa18.64■□□□□ 0.58
SNX27-202ENST00000368841 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.64■□□□□ 0.58
SNX27-202ENST00000368841 FAM86B1E9PN63 330 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 FAM171A1Q5VUB5 890 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 SPPL2AQ8TCT8 520 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 SEMA6AQ9H2E6 1030 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 ELOVL6Q9H5J4 265 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 ANKEF1Q9NU02 776 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 CTNNAL1Q9UBT7 734 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 TRDMT1O14717 391 aaKnown RBP18.64■□□□□ 0.57
SNX27-202ENST00000368841 GRIN3BO60391 1043 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 PSMB9P28065 219 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 FMO4P31512 558 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 NT5C2P49902 561 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 GRIK3Q13003 919 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 FGD3Q5JSP0 725 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 BTN2A1Q7KYR7 527 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 UCMAQ8WVF2 138 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 SEMA6BQ9H3T3 888 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 CISHQ9NSE2 258 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 IPPQ9Y573 584 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 IFRD1O00458 451 aaPredicted RBP18.64■□□□□ 0.57
SNX27-202ENST00000368841 SPAG6O75602 509 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 ITGALP20701 1170 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 MGAT1P26572 445 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 ABCG1P45844 678 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 PDIA6Q15084 440 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 POMGNT2Q8NAT1 580 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 OGTO15294 1046 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 PEX1O43933 1283 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 VDRP11473 427 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 PPATQ06203 517 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 SYTL1Q8IYJ3 562 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 ROPN1BQ9BZX4 212 aaPredicted RBP18.64■□□□□ 0.57
SNX27-202ENST00000368841 ROPN1Q9HAT0 212 aaPredicted RBP18.64■□□□□ 0.57
SNX27-202ENST00000368841 ZNF189O75820 626 aaPredicted RBP18.64■□□□□ 0.57
SNX27-202ENST00000368841 GHRP10912 638 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 OR1E1P30953 314 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 CAP2P40123 477 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 MACC1Q6ZN28 852 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 ZDHHC6Q9H6R6 413 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 ACTR8Q9H981 624 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 SNCAIPQ9Y6H5 919 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 CAPN6Q9Y6Q1 641 aa18.64■□□□□ 0.57
SNX27-202ENST00000368841 EPHX2P34913 555 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 CDH8P55286 799 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 HERVK_113P62684 666 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 ZSWIM7Q19AV6 140 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 DPP10Q8N608 796 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 TAS1R2Q8TE23 839 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 GFM2Q969S9 779 aaKnown RBP18.63■□□□□ 0.57
SNX27-202ENST00000368841 UBE2OQ9C0C9 1292 aaKnown RBP18.63■□□□□ 0.57
SNX27-202ENST00000368841 AGO4Q9HCK5 861 aaKnown RBP18.63■□□□□ 0.57
SNX27-202ENST00000368841 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.63■□□□□ 0.57
SNX27-202ENST00000368841 CRTAMO95727 393 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 SLC2A3P11169 496 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 GIT2Q14161 759 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 TAF5Q15542 800 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 SCUBE3Q8IX30 993 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 CAMKK2Q96RR4 588 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 CEP152O94986 1710 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 BCAT1P54687 386 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 SGCGQ13326 291 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms