RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 JAMLQ86YT9 394 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 GSPT2Q8IYD1 628 aaKnown RBP20.21■□□□□ 0.83
CHTOP-204ENST00000368694 PHOSPHO2Q8TCD6 241 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 DQX1Q8TE96 717 aaKnown RBP20.21■□□□□ 0.83
CHTOP-204ENST00000368694 RNF139Q8WU17 664 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 IFT81Q8WYA0 676 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 RAB17Q9H0T7 212 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 NMUR1Q9HB89 426 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 GMIPQ9P107 970 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 STK39Q9UEW8 545 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 LCHNA4D1U4 455 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ECEL1O95672 775 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 LINC00271P0C7V0 271 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ATF6P18850 670 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 L1CAMP32004 1257 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 FAM193AP78312 1265 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 EFHC2Q5JST6 749 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ARHGAP18Q8N392 663 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 KLHL23Q8NBE8 558 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 GRK7Q8WTQ7 553 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 RNF34Q969K3 372 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ZNF670Q9BS34 389 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 MAGEB5Q9BZ81 275 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 TRIM31Q9BZY9 425 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 WDR6Q9NNW5 1121 aaKnown RBP20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ARFGAP3Q9NP61 516 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 GDF3Q9NR23 364 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 TMPRSS4Q9NRS4 437 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 MAGED2Q9UNF1 606 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-204ENST00000368694 FAM187AA6NFU0 413 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ATF2P15336 505 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 TFDP2Q14188 446 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ANKRD20A8PQ5CZ79 823 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 TPGS2Q68CL5 300 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 PYROXD2Q8N2H3 581 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 RNF157Q96PX1 679 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 KCTD15Q96SI1 283 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-204ENST00000368694 CYP4F11Q9HBI6 524 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 SAE1Q9UBE0 346 aaPredicted RBP20.2■□□□□ 0.82
CHTOP-204ENST00000368694 NUDT5Q9UKK9 219 aa20.2■□□□□ 0.82
CHTOP-204ENST00000368694 ABLIM3O94929 683 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 MYBL2P10244 700 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 GBP1P32455 592 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 PTGIRP43119 386 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 TAF10Q12962 218 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 PPP1R7Q15435 360 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 MAP9Q49MG5 647 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 CCNI2Q6ZMN8 369 aaPredicted RBP20.19■□□□□ 0.82
CHTOP-204ENST00000368694 PSTKQ8IV42 348 aaKnown RBP20.19■□□□□ 0.82
CHTOP-204ENST00000368694 TTC13Q8NBP0 860 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 CASKIN2Q8WXE0 1202 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 WDCPQ9H6R7 721 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 OSER1Q9NX31 292 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 IL37Q9NZH6 218 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 DNPEPQ9ULA0 475 aa20.19■□□□□ 0.82
CHTOP-204ENST00000368694 LIASO43766 372 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 SEC31AO94979 1220 aaKnown RBP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 SEC24AO95486 1093 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 IL4RP24394 825 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 CTNNB1P35222 781 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 ARL4AP40617 200 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 AIF1P55008 147 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 OTUD4Q01804 1114 aaKnown RBP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 BYSLQ13895 437 aaKnown RBP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 ARL13BQ3SXY8 428 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 VSIG1Q86XK7 387 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 ATL2Q8NHH9 583 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 SP7Q8TDD2 431 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 ZBP1Q9H171 429 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 DPH5Q9H2P9 285 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 TLR8Q9NR97 1041 aaKnown RBP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 MTMR10Q9NXD2 777 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 SFMBT1Q9UHJ3 866 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 FEZ2Q9UHY8 353 aaPredicted RBP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 FBXW11Q9UKB1 542 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 SLC38A8A6NNN8 435 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 APOC4-APOC2K7ER74 178 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 GAS8O95995 478 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 APOC2P02655 101 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 CARSP49589 748 aaKnown RBP20.18■□□□□ 0.82
CHTOP-204ENST00000368694 RAB33AQ14088 237 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 TRADDQ15628 312 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 FAM71BQ8TC56 605 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 ACTL9Q8TC94 416 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 ERP44Q9BS26 406 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 SMOC2Q9H3U7 446 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 ZNF148Q9UQR1 794 aa20.18■□□□□ 0.82
CHTOP-204ENST00000368694 FAM92AA1XBS5 289 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 PRRG1O14668 218 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 CSPG5O95196 566 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 CTSAP10619 480 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 TNFRSF8P28908 595 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 ELF1P32519 619 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 ADRA1BP35368 520 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 CREMQ03060 361 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 HLTFQ14527 1009 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHTOP-204ENST00000368694 GSTA5Q7RTV2 222 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 TMC7Q7Z402 723 aa20.17■□□□□ 0.82
CHTOP-204ENST00000368694 DDX42Q86XP3 938 aaKnown RBP eCLIP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms