RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 SHROOM1Q2M3G4 852 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 LENG1Q96BZ8 264 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 PDCD2LQ9BRP1 358 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 ZC4H2Q9NQZ6 224 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 SLC24A2Q9UI40 661 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 CES2O00748 559 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 TBX3O15119 743 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 PEX2P28328 305 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 SERPINB1P30740 379 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 PRKCIP41743 596 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 PSMD7P51665 324 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 C21orf59P57076 290 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 BFSP2Q13515 415 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 DUOXA2Q1HG44 320 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 LDLRAP1Q5SW96 308 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 USP50Q70EL3 339 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 SIX5Q8N196 739 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 GTF3C2Q8WUA4 911 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 MTMR9Q96QG7 549 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 ATXN2Q99700 1313 aaKnown RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 A8MXQ7 604 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 ZBTB24O43167 697 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 TBXAS1P24557 533 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 SLC1A6P48664 564 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 PIGHQ14442 188 aaPredicted RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
EBF3-202ENST00000368648 DGKDQ16760 1214 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 TRIM72Q6ZMU5 477 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 DHDDSQ86SQ9 333 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 FOXP3Q9BZS1 431 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 CCDC167Q9P0B6 97 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 MID2Q9UJV3 735 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 CDY2AQ9Y6F7 541 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 CDY1Q9Y6F8 540 aa11.13□□□□□ -0.63
EBF3-202ENST00000368648 GAKO14976 1311 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 AKAP12Q02952 1782 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 VWA5AO00534 786 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 DDX3YO15523 660 aaKnown RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 NFKBIAP25963 317 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 TAS2R40P59535 323 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 PDK1Q15118 436 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 AMHR2Q16671 573 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 TMC5Q6UXY8 1006 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 APLFQ8IW19 511 aaPredicted RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 TNS4Q8IZW8 715 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 EIF1ADQ8N9N8 165 aaKnown RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 PCDHB18PQ96TA0 734 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 DGCR6LQ9BY27 220 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 ILKAPQ9H0C8 392 aaPredicted RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 MROH8Q9H579 483 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 FAM96AQ9H5X1 160 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 IL1RAPL1Q9NZN1 696 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 MYO9BQ13459 2157 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 C15orf38-AP3S2A0A0A6YYH1 394 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 UBA6A0AVT1 1052 aaPredicted RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 SMAPO00193 183 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 LSM1O15116 133 aaKnown RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 MFN2O95140 757 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 MOCS2O96007 188 aaPredicted RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 GSSP48637 474 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 EFNA5P52803 228 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 AGKQ53H12 422 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 RALGPS1Q5JS13 557 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 VWA5B1Q5TIE3 1220 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 ZDHHC24Q6UX98 284 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 NPNTQ6UXI9 565 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 ENOSF1Q7L5Y1 443 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 ARPINQ7Z6K5 226 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 BHLHE22Q8NFJ8 381 aaPredicted RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 AFG1LQ8WV93 481 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 GFM2Q969S9 779 aaKnown RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 RMND5BQ96G75 393 aaPredicted RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 FSD1LQ9BXM9 530 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 LIN28AQ9H9Z2 209 aaKnown RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 GRHL1Q9NZI5 618 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 PRKAG3Q9UGI9 489 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 CDYLQ9Y232 598 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 CXCL11O14625 94 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 CLK1P49759 484 aaKnown RBP11.12□□□□□ -0.63
EBF3-202ENST00000368648 NRLP54845 237 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 NPY5RQ15761 445 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 PARP6Q2NL67 630 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 ARMC7Q9H6L4 198 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 HPS4Q9NQG7 708 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 YDJCA8MPS7 323 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 TM9SF1O15321 606 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 EIF3DO15371 548 aaKnown RBP eCLIP11.12□□□□□ -0.63
EBF3-202ENST00000368648 CPA3P15088 417 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 DSG3P32926 999 aa11.12□□□□□ -0.63
EBF3-202ENST00000368648 RAP1GAPP47736 663 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms