RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 MLNP12872 115 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF18P17022 549 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TAGLNQ01995 201 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PTPN12Q05209 780 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 C16orf72Q14CZ0 275 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 IFNL2Q8IZJ0 200 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SLC4A9Q96Q91 983 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 UBXN6Q9BZV1 441 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CFAP74Q9C0B2 1584 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 F8VZ95 297 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 WRBO00258 174 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PDE8BO95263 885 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 BMP1P13497 986 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 IL1RL1Q01638 556 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 FMO1Q01740 532 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ERMARDQ5T6L9 678 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 REXO5Q96IC2 774 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 QRSL1Q9H0R6 528 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 AP3D1O14617 1153 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SLC27A2O14975 620 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TADA2AO75478 443 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SRP72O76094 671 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 RBP3P10745 1247 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 RAB4AP20338 218 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 EIF6P56537 245 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MAPRE1Q15691 268 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CCDC142Q17RM4 750 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MTHFSDQ2M296 383 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 DYMQ7RTS9 669 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 AENQ8WTP8 325 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 FANCFQ9NPI8 374 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SLC12A6Q9UHW9 1150 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ZDHHC9Q9Y397 364 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NRXN1Q9ULB1 1477 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 H0YAE9 185 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MRPS10P82664 201 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 VEPH1Q14D04 833 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SH3BP5LQ7L8J4 393 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ZC3HC1Q86WB0 502 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 LCORLQ8N3X6 602 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 FAM45AQ8TCE6 357 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SMURF1Q9HCE7 757 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ROBO3Q96MS0 1386 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CFAP43Q8NDM7 1665 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 HSMCR30P0CW71 290 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 FUT4P22083 530 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TMOD1P28289 359 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 GUCY2DQ02846 1103 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ST3GAL1Q11201 340 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TRAM1Q15629 374 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ARMC4Q5T2S8 1044 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 BBS7Q8IWZ6 715 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TBC1D21Q8IYX1 336 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CEP295NLQ96MC4 621 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 HOPXQ9BPY8 73 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PCDH9Q9HC56 1237 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ATP13A1Q9HD20 1204 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 LRRC42Q9Y546 428 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PTK6Q13882 451 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 JADE1Q6IE81 842 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ALKBH5Q6P6C2 394 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 DHDDSQ86SQ9 333 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CHURC1Q8WUH1 139 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 EYA3Q99504 573 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TMEM245Q9H330 911 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NLRP1Q9C000 1473 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 GPAA1O43292 621 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TNFAIP3P21580 790 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 AGTR1P30556 359 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MPP1Q00013 466 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 UBE2E3Q969T4 207 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MED30Q96HR3 178 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CORO1BQ9BR76 489 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MMP13P45452 471 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SEPHS1P49903 392 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 DDX43Q9NXZ2 648 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 FBXO40Q9UH90 709 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 UNC13AQ9UPW8 1703 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 RP9Q8TA86 221 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 REPS1Q96D71 796 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ILKAPQ9H0C8 392 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 MCM8Q9UJA3 840 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 BTBD3Q9Y2F9 522 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ATMINO43313 823 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CKMT1AP12532 417 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PNLIPRP1P54315 467 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PTPAQ15257 358 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 TAF5Q15542 800 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NDUFAF5Q5TEU4 345 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 SCUBE3Q8IX30 993 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CLYBLQ8N0X4 340 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 EXD2Q9NVH0 621 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NPIPA5A0A0B4J1W7 369 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 LZTS3O60299 673 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 ULK1O75385 1050 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 CDK9P50750 372 aaKnown RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 NCKAP1LP55160 1127 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 GALNT1Q10472 559 aaPredicted RBP3.86□□□□□ -1.79
SYNE1-207ENST00000367255 PEX6Q13608 980 aa3.86□□□□□ -1.79
SYNE1-207ENST00000367255 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms