RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CACNA1BQ00975 2339 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 ANTXRLA6NF34 631 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 KCNK5O95279 499 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 GABRG2P18507 467 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 ZNF132P52740 706 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 YWHAGP61981 247 aaKnown RBP eCLIP15.56■□□□□ 0.08
CTSD-202ENST00000367196 RPL6Q02878 288 aaKnown RBP15.56■□□□□ 0.08
CTSD-202ENST00000367196 CETN1Q12798 172 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 EFEMP1Q12805 493 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 CUL2Q13617 745 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 MAP7D1Q3KQU3 841 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 TRIM61Q5EBN2 209 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 RAB41Q5JT25 222 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 EGFLAMQ63HQ2 1017 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 SCD5Q86SK9 330 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 ZC3H3Q8IXZ2 948 aaKnown RBP15.56■□□□□ 0.08
CTSD-202ENST00000367196 TMEFF1Q8IYR6 380 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 CEP76Q8TAP6 659 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 PLD4Q96BZ4 506 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 TIGD1Q96MW7 591 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 GABRG3Q99928 467 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 METTL14Q9HCE5 456 aaKnown RBP15.56■□□□□ 0.08
CTSD-202ENST00000367196 CALCOCO1Q9P1Z2 691 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 SLC27A6Q9Y2P4 619 aa15.56■□□□□ 0.08
CTSD-202ENST00000367196 XPO1O14980 1071 aaKnown RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 ZBED1O96006 694 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 PENKP01210 267 aaPredicted RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 CORO1AP31146 461 aaKnown RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 NOVA1P51513 510 aaKnown RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 ZNF445P59923 1031 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 BST2Q10589 180 aaKnown RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 GOLGA7BQ2TAP0 167 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 CBWD6Q4V339 395 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 CBWD3Q5JTY5 395 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 CBWD5Q5RIA9 395 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 ARMCX6Q7L4S7 300 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 CPXM2Q8N436 756 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 SPATA20Q8TB22 786 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 IPO4Q8TEX9 1081 aaKnown RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 BHMTQ93088 406 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 IPO9Q96P70 1041 aaKnown RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 ARID3AQ99856 593 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 LRRC4Q9HBW1 653 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 MARCH2Q9P0N8 246 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 MBD1Q9UIS9 605 aaPredicted RBP15.55■□□□□ 0.08
CTSD-202ENST00000367196 TSPAN16Q9UKR8 245 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 KIAA1257Q9ULG3 409 aa15.55■□□□□ 0.08
CTSD-202ENST00000367196 A0A1W2PQF6 199 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 TRIM24O15164 1050 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 SETSIPP0DME0 302 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 CSRP1P21291 193 aaKnown RBP15.54■□□□□ 0.08
CTSD-202ENST00000367196 PMLP29590 882 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 WASP42768 502 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 TKTL1P51854 596 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 ATXN3P54252 364 aaPredicted RBP15.54■□□□□ 0.08
CTSD-202ENST00000367196 SHC2P98077 582 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 EIF4HQ15056 248 aaKnown RBP15.54■□□□□ 0.08
CTSD-202ENST00000367196 N4BP2L1Q5TBK1 243 aaPredicted RBP15.54■□□□□ 0.08
CTSD-202ENST00000367196 PEAR1Q5VY43 1037 aaPredicted RBP15.54■□□□□ 0.08
CTSD-202ENST00000367196 ANKRD40Q6AI12 368 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 PM20D1Q6GTS8 502 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 PSAPL1Q6NUJ1 521 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 TOGARAM2Q6ZUX3 1019 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 ANKS1BQ7Z6G8 1248 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 SIX6OS1Q8N1H7 587 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 RNF139Q8WU17 664 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 TATDN2Q93075 761 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 DHTKD1Q96HY7 919 aaPredicted RBP15.54■□□□□ 0.08
CTSD-202ENST00000367196 CEP63Q96MT8 703 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 FBXO10Q9UK96 956 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 CEP192Q8TEP8 1941 aa15.54■□□□□ 0.08
CTSD-202ENST00000367196 PI4KAP42356 2102 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 PATE3B3GLJ2 98 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 PRRT4C9JH25 899 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 NDUFS2O75306 463 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 HMBSP08397 361 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 VDRP11473 427 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 CEACAM1P13688 526 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 CD19P15391 556 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 NDUFV2P19404 249 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 PTGER3P43115 390 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 HARS2P49590 506 aaKnown RBP15.53■□□□□ 0.08
CTSD-202ENST00000367196 IRX4P78413 519 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 DUOXA1Q1HG43 343 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 FYB2Q5VWT5 728 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 SLC23A3Q6PIS1 610 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 DENND1CQ8IV53 801 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 ELOA2Q8IYF1 753 aaPredicted RBP15.53■□□□□ 0.08
CTSD-202ENST00000367196 SLC35C1Q96A29 364 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 SLC2A11Q9BYW1 496 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 ULBP1Q9BZM6 244 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 PLK2Q9NYY3 685 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 PILRBQ9UKJ0 227 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 HBS1LQ9Y450 684 aaKnown RBP15.53■□□□□ 0.08
CTSD-202ENST00000367196 CHD8Q9HCK8 2581 aa15.53■□□□□ 0.08
CTSD-202ENST00000367196 IGHV1OR15-9A0A0B4J2B8 117 aa15.52■□□□□ 0.08
CTSD-202ENST00000367196 SLC12A8A0AV02 714 aa15.52■□□□□ 0.08
CTSD-202ENST00000367196 BICDL2A1A5D9 508 aa15.52■□□□□ 0.08
CTSD-202ENST00000367196 KLKB1P03952 638 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms